Protein–RNA interactions for Protein: F6S0S7

E130114P18Rik, RIKEN cDNA E130114P18 gene (Fragment), mousemouse

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E130114P18RikF6S0S7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
E130114P18RikF6S0S7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
E130114P18RikF6S0S7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
E130114P18RikF6S0S7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
E130114P18RikF6S0S7 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.76■□□□□ 0.43
E130114P18RikF6S0S7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
E130114P18RikF6S0S7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
E130114P18RikF6S0S7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
E130114P18RikF6S0S7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
E130114P18RikF6S0S7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
E130114P18RikF6S0S7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
E130114P18RikF6S0S7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
E130114P18RikF6S0S7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
E130114P18RikF6S0S7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
E130114P18RikF6S0S7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
E130114P18RikF6S0S7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.73■□□□□ 0.43
E130114P18RikF6S0S7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
E130114P18RikF6S0S7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
E130114P18RikF6S0S7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
E130114P18RikF6S0S7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
E130114P18RikF6S0S7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
E130114P18RikF6S0S7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
E130114P18RikF6S0S7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.71■□□□□ 0.43
E130114P18RikF6S0S7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
E130114P18RikF6S0S7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
E130114P18RikF6S0S7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
E130114P18RikF6S0S7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.68■□□□□ 0.42
E130114P18RikF6S0S7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E130114P18RikF6S0S7 Cap2-205ENSMUST00000225824 1634 ntBASIC17.68■□□□□ 0.42
E130114P18RikF6S0S7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.67■□□□□ 0.42
E130114P18RikF6S0S7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E130114P18RikF6S0S7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
E130114P18RikF6S0S7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.66■□□□□ 0.42
E130114P18RikF6S0S7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.65■□□□□ 0.42
E130114P18RikF6S0S7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
E130114P18RikF6S0S7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.65■□□□□ 0.42
E130114P18RikF6S0S7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
E130114P18RikF6S0S7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
E130114P18RikF6S0S7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
E130114P18RikF6S0S7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
E130114P18RikF6S0S7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
E130114P18RikF6S0S7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
E130114P18RikF6S0S7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
E130114P18RikF6S0S7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
E130114P18RikF6S0S7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
E130114P18RikF6S0S7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
E130114P18RikF6S0S7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
E130114P18RikF6S0S7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
E130114P18RikF6S0S7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
E130114P18RikF6S0S7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
E130114P18RikF6S0S7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
E130114P18RikF6S0S7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.61■□□□□ 0.41
E130114P18RikF6S0S7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.61■□□□□ 0.41
E130114P18RikF6S0S7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.61■□□□□ 0.41
E130114P18RikF6S0S7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
E130114P18RikF6S0S7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.61■□□□□ 0.41
E130114P18RikF6S0S7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
E130114P18RikF6S0S7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
E130114P18RikF6S0S7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
E130114P18RikF6S0S7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
E130114P18RikF6S0S7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
E130114P18RikF6S0S7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
E130114P18RikF6S0S7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
E130114P18RikF6S0S7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
E130114P18RikF6S0S7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.59■□□□□ 0.41
E130114P18RikF6S0S7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
E130114P18RikF6S0S7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
E130114P18RikF6S0S7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
E130114P18RikF6S0S7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E130114P18RikF6S0S7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E130114P18RikF6S0S7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E130114P18RikF6S0S7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
E130114P18RikF6S0S7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
E130114P18RikF6S0S7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
E130114P18RikF6S0S7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
E130114P18RikF6S0S7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
E130114P18RikF6S0S7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
E130114P18RikF6S0S7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E130114P18RikF6S0S7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.56■□□□□ 0.4
E130114P18RikF6S0S7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
E130114P18RikF6S0S7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.55■□□□□ 0.4
E130114P18RikF6S0S7 Gm11687-201ENSMUST00000118911 886 ntBASIC17.55■□□□□ 0.4
E130114P18RikF6S0S7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
E130114P18RikF6S0S7 Gm4799-201ENSMUST00000095396 657 ntBASIC17.54■□□□□ 0.4
E130114P18RikF6S0S7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
E130114P18RikF6S0S7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Scarna2-201ENSMUST00000157560 414 ntBASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.53■□□□□ 0.4
E130114P18RikF6S0S7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
E130114P18RikF6S0S7 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.52■□□□□ 0.4
E130114P18RikF6S0S7 Gm9806-201ENSMUST00000051080 552 ntBASIC17.52■□□□□ 0.4
E130114P18RikF6S0S7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
E130114P18RikF6S0S7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
E130114P18RikF6S0S7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms