Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm30023-201ENSMUST00000197970 889 ntBASIC35.1■■■■□ 3.21
Hfm1D3Z4R1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Hfm1D3Z4R1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC35.08■■■■□ 3.21
Hfm1D3Z4R1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC35.08■■■■□ 3.21
Hfm1D3Z4R1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Hfm1D3Z4R1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC35.07■■■■□ 3.21
Hfm1D3Z4R1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Hfm1D3Z4R1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
Hfm1D3Z4R1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Hfm1D3Z4R1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Hfm1D3Z4R1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC35.05■■■■□ 3.2
Hfm1D3Z4R1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC35.04■■■■□ 3.2
Hfm1D3Z4R1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Hfm1D3Z4R1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Hfm1D3Z4R1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Hfm1D3Z4R1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
Hfm1D3Z4R1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Hfm1D3Z4R1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Hfm1D3Z4R1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Hfm1D3Z4R1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Hfm1D3Z4R1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Hfm1D3Z4R1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Hfm1D3Z4R1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC34.95■■■■□ 3.19
Hfm1D3Z4R1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Hfm1D3Z4R1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Hfm1D3Z4R1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
Hfm1D3Z4R1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Hfm1D3Z4R1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Hfm1D3Z4R1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
Hfm1D3Z4R1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC34.89■■■■□ 3.18
Hfm1D3Z4R1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Hfm1D3Z4R1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Hfm1D3Z4R1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Hfm1D3Z4R1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Hfm1D3Z4R1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Hfm1D3Z4R1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Gm12366-201ENSMUST00000121722 873 ntBASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Gm5786-201ENSMUST00000085368 882 ntBASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Hfm1D3Z4R1 Scarna2-201ENSMUST00000157560 414 ntBASIC34.85■■■■□ 3.17
Hfm1D3Z4R1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Hfm1D3Z4R1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
Hfm1D3Z4R1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC34.84■■■■□ 3.17
Hfm1D3Z4R1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
Hfm1D3Z4R1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC34.82■■■■□ 3.17
Hfm1D3Z4R1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
Hfm1D3Z4R1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Hfm1D3Z4R1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Hfm1D3Z4R1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Hfm1D3Z4R1 Pcf11-205ENSMUST00000208255 1720 ntBASIC34.79■■■■□ 3.16
Hfm1D3Z4R1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Hfm1D3Z4R1 Gm9806-201ENSMUST00000051080 552 ntBASIC34.79■■■■□ 3.16
Hfm1D3Z4R1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Hfm1D3Z4R1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC34.78■■■■□ 3.16
Hfm1D3Z4R1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Hfm1D3Z4R1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Hfm1D3Z4R1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.16
Hfm1D3Z4R1 Gm11687-201ENSMUST00000118911 886 ntBASIC34.76■■■■□ 3.16
Hfm1D3Z4R1 Gm4799-201ENSMUST00000095396 657 ntBASIC34.76■■■■□ 3.16
Hfm1D3Z4R1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Hfm1D3Z4R1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC34.75■■■■□ 3.15
Hfm1D3Z4R1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Hfm1D3Z4R1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Hfm1D3Z4R1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
Hfm1D3Z4R1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Hfm1D3Z4R1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC34.74■■■■□ 3.15
Hfm1D3Z4R1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Hfm1D3Z4R1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Hfm1D3Z4R1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Hfm1D3Z4R1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Hfm1D3Z4R1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Hfm1D3Z4R1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC34.72■■■■□ 3.15
Hfm1D3Z4R1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC34.72■■■■□ 3.15
Hfm1D3Z4R1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC34.72■■■■□ 3.15
Hfm1D3Z4R1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC34.71■■■■□ 3.15
Hfm1D3Z4R1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Hfm1D3Z4R1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
Hfm1D3Z4R1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC34.69■■■■□ 3.14
Hfm1D3Z4R1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Hfm1D3Z4R1 AC154454.1-201ENSMUST00000225253 216 ntBASIC34.68■■■■□ 3.14
Hfm1D3Z4R1 Pkd1-207ENSMUST00000228550 1050 ntBASIC34.66■■■■□ 3.14
Hfm1D3Z4R1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC34.64■■■■□ 3.14
Hfm1D3Z4R1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Hfm1D3Z4R1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
Hfm1D3Z4R1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Hfm1D3Z4R1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC34.62■■■■□ 3.13
Hfm1D3Z4R1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC34.61■■■■□ 3.13
Hfm1D3Z4R1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Hfm1D3Z4R1 Gm16437-201ENSMUST00000025669 507 ntBASIC34.6■■■■□ 3.13
Hfm1D3Z4R1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
Hfm1D3Z4R1 Gm45364-201ENSMUST00000210883 159 ntBASIC34.59■■■■□ 3.13
Hfm1D3Z4R1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Hfm1D3Z4R1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Hfm1D3Z4R1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC34.57■■■■□ 3.13
Hfm1D3Z4R1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms