Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.88■□□□□ 0.93
SRRM4A7MD48 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM4A7MD48 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SRRM4A7MD48 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM4A7MD48 DRD5P2-201ENST00000421395 2012 ntBASIC20.87■□□□□ 0.93
SRRM4A7MD48 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.87■□□□□ 0.93
SRRM4A7MD48 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.87■□□□□ 0.93
SRRM4A7MD48 AC127502.1-201ENST00000399971 1502 ntBASIC20.87■□□□□ 0.93
SRRM4A7MD48 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.87■□□□□ 0.93
SRRM4A7MD48 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM4A7MD48 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SRRM4A7MD48 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SRRM4A7MD48 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM4A7MD48 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM4A7MD48 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM4A7MD48 AC142086.6-201ENST00000621154 1765 ntBASIC20.85■□□□□ 0.93
SRRM4A7MD48 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRRM4A7MD48 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SRRM4A7MD48 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRRM4A7MD48 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRRM4A7MD48 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRRM4A7MD48 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRRM4A7MD48 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRRM4A7MD48 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.83■□□□□ 0.92
SRRM4A7MD48 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.83■□□□□ 0.92
SRRM4A7MD48 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRRM4A7MD48 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.83■□□□□ 0.92
SRRM4A7MD48 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRRM4A7MD48 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRRM4A7MD48 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRRM4A7MD48 AC005559.1-201ENST00000589661 871 ntBASIC20.82■□□□□ 0.92
SRRM4A7MD48 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.81■□□□□ 0.92
SRRM4A7MD48 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRRM4A7MD48 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRRM4A7MD48 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SRRM4A7MD48 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRRM4A7MD48 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRRM4A7MD48 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRRM4A7MD48 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SRRM4A7MD48 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
SRRM4A7MD48 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SRRM4A7MD48 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM4A7MD48 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.79■□□□□ 0.92
SRRM4A7MD48 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM4A7MD48 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM4A7MD48 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.78■□□□□ 0.92
SRRM4A7MD48 AP004833.2-201ENST00000532228 1454 ntBASIC20.78■□□□□ 0.92
SRRM4A7MD48 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.78■□□□□ 0.92
SRRM4A7MD48 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM4A7MD48 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM4A7MD48 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SRRM4A7MD48 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM4A7MD48 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM4A7MD48 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM4A7MD48 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.77■□□□□ 0.92
SRRM4A7MD48 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM4A7MD48 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.77■□□□□ 0.92
SRRM4A7MD48 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SRRM4A7MD48 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM4A7MD48 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.76■□□□□ 0.91
SRRM4A7MD48 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRRM4A7MD48 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.75■□□□□ 0.91
SRRM4A7MD48 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.75■□□□□ 0.91
SRRM4A7MD48 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM4A7MD48 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRRM4A7MD48 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM4A7MD48 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRRM4A7MD48 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SRRM4A7MD48 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.73■□□□□ 0.91
SRRM4A7MD48 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.73■□□□□ 0.91
SRRM4A7MD48 DUX4L28-201ENST00000623687 678 ntBASIC20.73■□□□□ 0.91
SRRM4A7MD48 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM4A7MD48 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRRM4A7MD48 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM4A7MD48 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SRRM4A7MD48 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.72■□□□□ 0.91
SRRM4A7MD48 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM4A7MD48 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM4A7MD48 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRRM4A7MD48 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM4A7MD48 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM4A7MD48 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM4A7MD48 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.71■□□□□ 0.91
SRRM4A7MD48 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRRM4A7MD48 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM4A7MD48 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM4A7MD48 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRRM4A7MD48 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.7■□□□□ 0.9
SRRM4A7MD48 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SRRM4A7MD48 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM4A7MD48 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM4A7MD48 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.69■□□□□ 0.9
SRRM4A7MD48 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.69■□□□□ 0.9
SRRM4A7MD48 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRRM4A7MD48 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.69■□□□□ 0.9
SRRM4A7MD48 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM4A7MD48 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM4A7MD48 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRRM4A7MD48 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.68■□□□□ 0.9
SRRM4A7MD48 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms