Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMIM23A6NLE4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMIM23A6NLE4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
SMIM23A6NLE4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
SMIM23A6NLE4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.36■■□□□ 1.81
SMIM23A6NLE4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMIM23A6NLE4 WASH5P-204ENST00000632292 975 ntBASIC26.36■■□□□ 1.81
SMIM23A6NLE4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMIM23A6NLE4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.36■■□□□ 1.81
SMIM23A6NLE4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMIM23A6NLE4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMIM23A6NLE4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMIM23A6NLE4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMIM23A6NLE4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMIM23A6NLE4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.35■■□□□ 1.81
SMIM23A6NLE4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMIM23A6NLE4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMIM23A6NLE4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMIM23A6NLE4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.34■■□□□ 1.81
SMIM23A6NLE4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMIM23A6NLE4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMIM23A6NLE4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMIM23A6NLE4 AC135731.1-201ENST00000569415 2548 ntBASIC26.32■■□□□ 1.8
SMIM23A6NLE4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMIM23A6NLE4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM23A6NLE4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.31■■□□□ 1.8
SMIM23A6NLE4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.31■■□□□ 1.8
SMIM23A6NLE4 AC010864.1-201ENST00000609407 1511 ntBASIC26.31■■□□□ 1.8
SMIM23A6NLE4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM23A6NLE4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
SMIM23A6NLE4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SMIM23A6NLE4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM23A6NLE4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
SMIM23A6NLE4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMIM23A6NLE4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMIM23A6NLE4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SMIM23A6NLE4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.29■■□□□ 1.8
SMIM23A6NLE4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.29■■□□□ 1.8
SMIM23A6NLE4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.29■■□□□ 1.8
SMIM23A6NLE4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SMIM23A6NLE4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.29■■□□□ 1.8
SMIM23A6NLE4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SMIM23A6NLE4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMIM23A6NLE4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.28■■□□□ 1.8
SMIM23A6NLE4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMIM23A6NLE4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMIM23A6NLE4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMIM23A6NLE4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMIM23A6NLE4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.26■■□□□ 1.79
SMIM23A6NLE4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMIM23A6NLE4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMIM23A6NLE4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.25■■□□□ 1.79
SMIM23A6NLE4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.24■■□□□ 1.79
SMIM23A6NLE4 AP002365.1-201ENST00000603448 772 ntBASIC26.24■■□□□ 1.79
SMIM23A6NLE4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SMIM23A6NLE4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.24■■□□□ 1.79
SMIM23A6NLE4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMIM23A6NLE4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMIM23A6NLE4 BX255925.1-201ENST00000566954 1854 ntBASIC26.22■■□□□ 1.79
SMIM23A6NLE4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMIM23A6NLE4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMIM23A6NLE4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SMIM23A6NLE4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SMIM23A6NLE4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
SMIM23A6NLE4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMIM23A6NLE4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMIM23A6NLE4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMIM23A6NLE4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SMIM23A6NLE4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
SMIM23A6NLE4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
SMIM23A6NLE4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.17■■□□□ 1.78
SMIM23A6NLE4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMIM23A6NLE4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMIM23A6NLE4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMIM23A6NLE4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SMIM23A6NLE4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.16■■□□□ 1.78
SMIM23A6NLE4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.16■■□□□ 1.78
SMIM23A6NLE4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMIM23A6NLE4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SMIM23A6NLE4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMIM23A6NLE4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.15■■□□□ 1.78
SMIM23A6NLE4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMIM23A6NLE4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
SMIM23A6NLE4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMIM23A6NLE4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMIM23A6NLE4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMIM23A6NLE4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
SMIM23A6NLE4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMIM23A6NLE4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMIM23A6NLE4 AL133380.1-201ENST00000506013 324 ntBASIC26.11■■□□□ 1.77
SMIM23A6NLE4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.11■■□□□ 1.77
SMIM23A6NLE4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
SMIM23A6NLE4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMIM23A6NLE4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.1■■□□□ 1.77
SMIM23A6NLE4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMIM23A6NLE4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMIM23A6NLE4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SMIM23A6NLE4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMIM23A6NLE4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMIM23A6NLE4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms