Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01546A6NGU7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01546A6NGU7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.56■□□□□ 0.56
LINC01546A6NGU7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01546A6NGU7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01546A6NGU7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LINC01546A6NGU7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01546A6NGU7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01546A6NGU7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01546A6NGU7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01546A6NGU7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01546A6NGU7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01546A6NGU7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01546A6NGU7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01546A6NGU7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.53■□□□□ 0.56
LINC01546A6NGU7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01546A6NGU7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01546A6NGU7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC01546A6NGU7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01546A6NGU7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01546A6NGU7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01546A6NGU7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC01546A6NGU7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01546A6NGU7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.51■□□□□ 0.55
LINC01546A6NGU7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01546A6NGU7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01546A6NGU7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01546A6NGU7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01546A6NGU7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LINC01546A6NGU7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01546A6NGU7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LINC01546A6NGU7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LINC01546A6NGU7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC01546A6NGU7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01546A6NGU7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01546A6NGU7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01546A6NGU7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01546A6NGU7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01546A6NGU7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC01546A6NGU7 LINC01003-201ENST00000564834 1764 ntBASIC18.46■□□□□ 0.55
LINC01546A6NGU7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01546A6NGU7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01546A6NGU7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01546A6NGU7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01546A6NGU7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01546A6NGU7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LINC01546A6NGU7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01546A6NGU7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01546A6NGU7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01546A6NGU7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC01546A6NGU7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC01546A6NGU7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01546A6NGU7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01546A6NGU7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01546A6NGU7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LINC01546A6NGU7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01546A6NGU7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01546A6NGU7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC01546A6NGU7 AC091060.1-201ENST00000623524 1766 ntBASIC18.42■□□□□ 0.54
LINC01546A6NGU7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.42■□□□□ 0.54
LINC01546A6NGU7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.42■□□□□ 0.54
LINC01546A6NGU7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LINC01546A6NGU7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LINC01546A6NGU7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01546A6NGU7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01546A6NGU7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.42■□□□□ 0.54
LINC01546A6NGU7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01546A6NGU7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC01546A6NGU7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LINC01546A6NGU7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01546A6NGU7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01546A6NGU7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01546A6NGU7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01546A6NGU7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01546A6NGU7 AP004833.2-201ENST00000532228 1454 ntBASIC18.4■□□□□ 0.54
LINC01546A6NGU7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01546A6NGU7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01546A6NGU7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01546A6NGU7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01546A6NGU7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINC01546A6NGU7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01546A6NGU7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
LINC01546A6NGU7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01546A6NGU7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LINC01546A6NGU7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01546A6NGU7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01546A6NGU7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01546A6NGU7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01546A6NGU7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01546A6NGU7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.35■□□□□ 0.53
LINC01546A6NGU7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms