Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 AC087741.3-201ENST00000624270 1347 ntBASIC23.92■■□□□ 1.42
SH3D21A4FU49 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SH3D21A4FU49 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SH3D21A4FU49 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SH3D21A4FU49 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.91■■□□□ 1.42
SH3D21A4FU49 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3D21A4FU49 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3D21A4FU49 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3D21A4FU49 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
SH3D21A4FU49 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.88■■□□□ 1.41
SH3D21A4FU49 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SH3D21A4FU49 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.87■■□□□ 1.41
SH3D21A4FU49 AC044849.2-201ENST00000606596 710 ntBASIC23.87■■□□□ 1.41
SH3D21A4FU49 AL139393.2-201ENST00000608721 2025 ntBASIC23.87■■□□□ 1.41
SH3D21A4FU49 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SH3D21A4FU49 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3D21A4FU49 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.85■■□□□ 1.41
SH3D21A4FU49 WASH5P-204ENST00000632292 975 ntBASIC23.85■■□□□ 1.41
SH3D21A4FU49 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3D21A4FU49 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3D21A4FU49 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SH3D21A4FU49 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3D21A4FU49 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3D21A4FU49 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3D21A4FU49 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SH3D21A4FU49 DRD5P2-201ENST00000421395 2012 ntBASIC23.83■■□□□ 1.41
SH3D21A4FU49 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SH3D21A4FU49 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.81■■□□□ 1.4
SH3D21A4FU49 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.81■■□□□ 1.4
SH3D21A4FU49 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3D21A4FU49 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3D21A4FU49 ABHD17AP4-201ENST00000411545 909 ntBASIC23.8■■□□□ 1.4
SH3D21A4FU49 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SH3D21A4FU49 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3D21A4FU49 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.79■■□□□ 1.4
SH3D21A4FU49 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.79■■□□□ 1.4
SH3D21A4FU49 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3D21A4FU49 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SH3D21A4FU49 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SH3D21A4FU49 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SH3D21A4FU49 AL121749.1-202ENST00000609313 2153 ntBASIC23.79■■□□□ 1.4
SH3D21A4FU49 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SH3D21A4FU49 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.78■■□□□ 1.4
SH3D21A4FU49 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3D21A4FU49 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3D21A4FU49 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3D21A4FU49 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SH3D21A4FU49 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3D21A4FU49 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3D21A4FU49 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3D21A4FU49 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3D21A4FU49 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SH3D21A4FU49 MIR7108-201ENST00000614319 87 ntBASIC23.75■■□□□ 1.39
SH3D21A4FU49 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3D21A4FU49 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
SH3D21A4FU49 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.74■■□□□ 1.39
SH3D21A4FU49 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SH3D21A4FU49 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3D21A4FU49 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3D21A4FU49 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3D21A4FU49 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3D21A4FU49 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SH3D21A4FU49 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.72■■□□□ 1.39
SH3D21A4FU49 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SH3D21A4FU49 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
SH3D21A4FU49 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH3D21A4FU49 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH3D21A4FU49 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SH3D21A4FU49 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.7■■□□□ 1.38
SH3D21A4FU49 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.69■■□□□ 1.38
SH3D21A4FU49 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SH3D21A4FU49 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3D21A4FU49 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SH3D21A4FU49 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
SH3D21A4FU49 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3D21A4FU49 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH3D21A4FU49 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH3D21A4FU49 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3D21A4FU49 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.68■■□□□ 1.38
SH3D21A4FU49 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.68■■□□□ 1.38
SH3D21A4FU49 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3D21A4FU49 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH3D21A4FU49 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH3D21A4FU49 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH3D21A4FU49 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.66■■□□□ 1.38
SH3D21A4FU49 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
SH3D21A4FU49 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SH3D21A4FU49 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SH3D21A4FU49 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH3D21A4FU49 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH3D21A4FU49 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SH3D21A4FU49 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.64■■□□□ 1.37
SH3D21A4FU49 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SH3D21A4FU49 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.64■■□□□ 1.37
SH3D21A4FU49 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH3D21A4FU49 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SH3D21A4FU49 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SH3D21A4FU49 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.63■■□□□ 1.37
SH3D21A4FU49 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.63■■□□□ 1.37
SH3D21A4FU49 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms