Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DUXBA0A1W2PPF3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
DUXBA0A1W2PPF3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.14■□□□□ 0.98
DUXBA0A1W2PPF3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.14■□□□□ 0.98
DUXBA0A1W2PPF3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DUXBA0A1W2PPF3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DUXBA0A1W2PPF3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.14■□□□□ 0.97
DUXBA0A1W2PPF3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.14■□□□□ 0.97
DUXBA0A1W2PPF3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DUXBA0A1W2PPF3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
DUXBA0A1W2PPF3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DUXBA0A1W2PPF3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DUXBA0A1W2PPF3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
DUXBA0A1W2PPF3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DUXBA0A1W2PPF3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
DUXBA0A1W2PPF3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DUXBA0A1W2PPF3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DUXBA0A1W2PPF3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DUXBA0A1W2PPF3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DUXBA0A1W2PPF3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DUXBA0A1W2PPF3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DUXBA0A1W2PPF3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DUXBA0A1W2PPF3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DUXBA0A1W2PPF3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DUXBA0A1W2PPF3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DUXBA0A1W2PPF3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DUXBA0A1W2PPF3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DUXBA0A1W2PPF3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.09■□□□□ 0.97
DUXBA0A1W2PPF3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DUXBA0A1W2PPF3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
DUXBA0A1W2PPF3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.08■□□□□ 0.97
DUXBA0A1W2PPF3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DUXBA0A1W2PPF3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.08■□□□□ 0.97
DUXBA0A1W2PPF3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DUXBA0A1W2PPF3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DUXBA0A1W2PPF3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
DUXBA0A1W2PPF3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.07■□□□□ 0.96
DUXBA0A1W2PPF3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DUXBA0A1W2PPF3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DUXBA0A1W2PPF3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DUXBA0A1W2PPF3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
DUXBA0A1W2PPF3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DUXBA0A1W2PPF3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.05■□□□□ 0.96
DUXBA0A1W2PPF3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DUXBA0A1W2PPF3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DUXBA0A1W2PPF3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.05■□□□□ 0.96
DUXBA0A1W2PPF3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DUXBA0A1W2PPF3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DUXBA0A1W2PPF3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.05■□□□□ 0.96
DUXBA0A1W2PPF3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.04■□□□□ 0.96
DUXBA0A1W2PPF3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.04■□□□□ 0.96
DUXBA0A1W2PPF3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DUXBA0A1W2PPF3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DUXBA0A1W2PPF3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
DUXBA0A1W2PPF3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DUXBA0A1W2PPF3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.02■□□□□ 0.96
DUXBA0A1W2PPF3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DUXBA0A1W2PPF3 AP002365.1-201ENST00000603448 772 ntBASIC21.02■□□□□ 0.96
DUXBA0A1W2PPF3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DUXBA0A1W2PPF3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DUXBA0A1W2PPF3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUXBA0A1W2PPF3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUXBA0A1W2PPF3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.01■□□□□ 0.95
DUXBA0A1W2PPF3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DUXBA0A1W2PPF3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DUXBA0A1W2PPF3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUXBA0A1W2PPF3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21■□□□□ 0.95
DUXBA0A1W2PPF3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
DUXBA0A1W2PPF3 LINC01003-201ENST00000564834 1764 ntBASIC21■□□□□ 0.95
DUXBA0A1W2PPF3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
DUXBA0A1W2PPF3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
DUXBA0A1W2PPF3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DUXBA0A1W2PPF3 AL133380.1-201ENST00000506013 324 ntBASIC20.99■□□□□ 0.95
DUXBA0A1W2PPF3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
DUXBA0A1W2PPF3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.98■□□□□ 0.95
DUXBA0A1W2PPF3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DUXBA0A1W2PPF3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUXBA0A1W2PPF3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DUXBA0A1W2PPF3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
DUXBA0A1W2PPF3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
DUXBA0A1W2PPF3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUXBA0A1W2PPF3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.96■□□□□ 0.95
DUXBA0A1W2PPF3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.95■□□□□ 0.94
DUXBA0A1W2PPF3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUXBA0A1W2PPF3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUXBA0A1W2PPF3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUXBA0A1W2PPF3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DUXBA0A1W2PPF3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUXBA0A1W2PPF3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DUXBA0A1W2PPF3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
DUXBA0A1W2PPF3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DUXBA0A1W2PPF3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.92■□□□□ 0.94
DUXBA0A1W2PPF3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.92■□□□□ 0.94
DUXBA0A1W2PPF3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.92■□□□□ 0.94
DUXBA0A1W2PPF3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.92■□□□□ 0.94
DUXBA0A1W2PPF3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
DUXBA0A1W2PPF3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
DUXBA0A1W2PPF3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DUXBA0A1W2PPF3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DUXBA0A1W2PPF3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms