Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv13-2A0A140T8N6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-2A0A140T8N6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-2A0A140T8N6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-2A0A140T8N6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-2A0A140T8N6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv13-2A0A140T8N6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.58■□□□□ 0.24
Trbv13-2A0A140T8N6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbv13-2A0A140T8N6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv13-2A0A140T8N6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-2A0A140T8N6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv13-2A0A140T8N6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv13-2A0A140T8N6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv13-2A0A140T8N6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv13-2A0A140T8N6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trbv13-2A0A140T8N6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-2A0A140T8N6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv13-2A0A140T8N6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.55■□□□□ 0.24
Trbv13-2A0A140T8N6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trbv13-2A0A140T8N6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv13-2A0A140T8N6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv13-2A0A140T8N6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv13-2A0A140T8N6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv13-2A0A140T8N6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.52■□□□□ 0.24
Trbv13-2A0A140T8N6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv13-2A0A140T8N6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv13-2A0A140T8N6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-2A0A140T8N6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-2A0A140T8N6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-2A0A140T8N6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-2A0A140T8N6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-2A0A140T8N6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-2A0A140T8N6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv13-2A0A140T8N6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-2A0A140T8N6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-2A0A140T8N6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-2A0A140T8N6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv13-2A0A140T8N6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv13-2A0A140T8N6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-2A0A140T8N6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-2A0A140T8N6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv13-2A0A140T8N6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-2A0A140T8N6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv13-2A0A140T8N6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-2A0A140T8N6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-2A0A140T8N6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv13-2A0A140T8N6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv13-2A0A140T8N6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbv13-2A0A140T8N6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-2A0A140T8N6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-2A0A140T8N6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-2A0A140T8N6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv13-2A0A140T8N6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv13-2A0A140T8N6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbv13-2A0A140T8N6 Gm30023-201ENSMUST00000197970 889 ntBASIC16.46■□□□□ 0.23
Trbv13-2A0A140T8N6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trbv13-2A0A140T8N6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv13-2A0A140T8N6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv13-2A0A140T8N6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.44■□□□□ 0.22
Trbv13-2A0A140T8N6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv13-2A0A140T8N6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-2A0A140T8N6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv13-2A0A140T8N6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-2A0A140T8N6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trbv13-2A0A140T8N6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-2A0A140T8N6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Trbv13-2A0A140T8N6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.42■□□□□ 0.22
Trbv13-2A0A140T8N6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-2A0A140T8N6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-2A0A140T8N6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trbv13-2A0A140T8N6 Nkain2-201ENSMUST00000092602 558 ntBASIC16.41■□□□□ 0.22
Trbv13-2A0A140T8N6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-2A0A140T8N6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trbv13-2A0A140T8N6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-2A0A140T8N6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-2A0A140T8N6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trbv13-2A0A140T8N6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-2A0A140T8N6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-2A0A140T8N6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv13-2A0A140T8N6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv13-2A0A140T8N6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv13-2A0A140T8N6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv13-2A0A140T8N6 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.39■□□□□ 0.21
Trbv13-2A0A140T8N6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv13-2A0A140T8N6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv13-2A0A140T8N6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Trbv13-2A0A140T8N6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv13-2A0A140T8N6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv13-2A0A140T8N6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv13-2A0A140T8N6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv13-2A0A140T8N6 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.37■□□□□ 0.21
Trbv13-2A0A140T8N6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Trbv13-2A0A140T8N6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv13-2A0A140T8N6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv13-2A0A140T8N6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv13-2A0A140T8N6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-2A0A140T8N6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-2A0A140T8N6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-2A0A140T8N6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-2A0A140T8N6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms