Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cfap99A0A140LIX9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cfap99A0A140LIX9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cfap99A0A140LIX9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.53■■■□□ 2.16
Cfap99A0A140LIX9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Cfap99A0A140LIX9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.52■■■□□ 2.16
Cfap99A0A140LIX9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Cfap99A0A140LIX9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cfap99A0A140LIX9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.51■■■□□ 2.16
Cfap99A0A140LIX9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.51■■■□□ 2.15
Cfap99A0A140LIX9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cfap99A0A140LIX9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.5■■■□□ 2.15
Cfap99A0A140LIX9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cfap99A0A140LIX9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cfap99A0A140LIX9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.48■■■□□ 2.15
Cfap99A0A140LIX9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cfap99A0A140LIX9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.47■■■□□ 2.15
Cfap99A0A140LIX9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cfap99A0A140LIX9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.45■■■□□ 2.14
Cfap99A0A140LIX9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Cfap99A0A140LIX9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cfap99A0A140LIX9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.44■■■□□ 2.14
Cfap99A0A140LIX9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Cfap99A0A140LIX9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Cfap99A0A140LIX9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Cfap99A0A140LIX9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Cfap99A0A140LIX9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cfap99A0A140LIX9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.42■■■□□ 2.14
Cfap99A0A140LIX9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cfap99A0A140LIX9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.4■■■□□ 2.14
Cfap99A0A140LIX9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.4■■■□□ 2.14
Cfap99A0A140LIX9 Mir6538-201ENSMUST00000183713 110 ntBASIC28.4■■■□□ 2.14
Cfap99A0A140LIX9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cfap99A0A140LIX9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cfap99A0A140LIX9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cfap99A0A140LIX9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cfap99A0A140LIX9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cfap99A0A140LIX9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Cfap99A0A140LIX9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Cfap99A0A140LIX9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Cfap99A0A140LIX9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cfap99A0A140LIX9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Cfap99A0A140LIX9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cfap99A0A140LIX9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.34■■■□□ 2.13
Cfap99A0A140LIX9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.34■■■□□ 2.13
Cfap99A0A140LIX9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cfap99A0A140LIX9 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.31■■■□□ 2.12
Cfap99A0A140LIX9 Gm11175-201ENSMUST00000116172 543 ntBASIC28.31■■■□□ 2.12
Cfap99A0A140LIX9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Cfap99A0A140LIX9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.31■■■□□ 2.12
Cfap99A0A140LIX9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cfap99A0A140LIX9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cfap99A0A140LIX9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cfap99A0A140LIX9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cfap99A0A140LIX9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Cfap99A0A140LIX9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
Cfap99A0A140LIX9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Cfap99A0A140LIX9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Cfap99A0A140LIX9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cfap99A0A140LIX9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cfap99A0A140LIX9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cfap99A0A140LIX9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cfap99A0A140LIX9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.27■■■□□ 2.12
Cfap99A0A140LIX9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.27■■■□□ 2.12
Cfap99A0A140LIX9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Cfap99A0A140LIX9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.26■■■□□ 2.11
Cfap99A0A140LIX9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cfap99A0A140LIX9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cfap99A0A140LIX9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cfap99A0A140LIX9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Cfap99A0A140LIX9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cfap99A0A140LIX9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Cfap99A0A140LIX9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cfap99A0A140LIX9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cfap99A0A140LIX9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Cfap99A0A140LIX9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cfap99A0A140LIX9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Cfap99A0A140LIX9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cfap99A0A140LIX9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cfap99A0A140LIX9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cfap99A0A140LIX9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cfap99A0A140LIX9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cfap99A0A140LIX9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cfap99A0A140LIX9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cfap99A0A140LIX9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cfap99A0A140LIX9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cfap99A0A140LIX9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Cfap99A0A140LIX9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cfap99A0A140LIX9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cfap99A0A140LIX9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms