Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Gm12366-201ENSMUST00000121722 873 ntBASIC29.9■■■□□ 2.38
Frmpd3A0A140LIW3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC29.9■■■□□ 2.38
Frmpd3A0A140LIW3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Frmpd3A0A140LIW3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC29.9■■■□□ 2.38
Frmpd3A0A140LIW3 Gm5786-201ENSMUST00000085368 882 ntBASIC29.9■■■□□ 2.38
Frmpd3A0A140LIW3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Frmpd3A0A140LIW3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Frmpd3A0A140LIW3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
Frmpd3A0A140LIW3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Frmpd3A0A140LIW3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC29.87■■■□□ 2.37
Frmpd3A0A140LIW3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Frmpd3A0A140LIW3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Frmpd3A0A140LIW3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Frmpd3A0A140LIW3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Frmpd3A0A140LIW3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Frmpd3A0A140LIW3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC29.86■■■□□ 2.37
Frmpd3A0A140LIW3 Gm30023-201ENSMUST00000197970 889 ntBASIC29.84■■■□□ 2.37
Frmpd3A0A140LIW3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Frmpd3A0A140LIW3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Frmpd3A0A140LIW3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Frmpd3A0A140LIW3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Frmpd3A0A140LIW3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Frmpd3A0A140LIW3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Frmpd3A0A140LIW3 Scarna2-201ENSMUST00000157560 414 ntBASIC29.8■■■□□ 2.36
Frmpd3A0A140LIW3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Frmpd3A0A140LIW3 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.79■■■□□ 2.36
Frmpd3A0A140LIW3 Gm4799-201ENSMUST00000095396 657 ntBASIC29.79■■■□□ 2.36
Frmpd3A0A140LIW3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Frmpd3A0A140LIW3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.77■■■□□ 2.36
Frmpd3A0A140LIW3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Frmpd3A0A140LIW3 Gm11687-201ENSMUST00000118911 886 ntBASIC29.76■■■□□ 2.35
Frmpd3A0A140LIW3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Frmpd3A0A140LIW3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
Frmpd3A0A140LIW3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Frmpd3A0A140LIW3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Frmpd3A0A140LIW3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Frmpd3A0A140LIW3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Frmpd3A0A140LIW3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC29.75■■■□□ 2.35
Frmpd3A0A140LIW3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Frmpd3A0A140LIW3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.72■■■□□ 2.35
Frmpd3A0A140LIW3 Gm9806-201ENSMUST00000051080 552 ntBASIC29.72■■■□□ 2.35
Frmpd3A0A140LIW3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Frmpd3A0A140LIW3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC29.72■■■□□ 2.35
Frmpd3A0A140LIW3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Frmpd3A0A140LIW3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Frmpd3A0A140LIW3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC29.72■■■□□ 2.35
Frmpd3A0A140LIW3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Frmpd3A0A140LIW3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC29.71■■■□□ 2.35
Frmpd3A0A140LIW3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Frmpd3A0A140LIW3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC29.69■■■□□ 2.34
Frmpd3A0A140LIW3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Frmpd3A0A140LIW3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Frmpd3A0A140LIW3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC29.67■■■□□ 2.34
Frmpd3A0A140LIW3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Frmpd3A0A140LIW3 Pkd1-207ENSMUST00000228550 1050 ntBASIC29.66■■■□□ 2.34
Frmpd3A0A140LIW3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Frmpd3A0A140LIW3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Frmpd3A0A140LIW3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Frmpd3A0A140LIW3 Gm27502-201ENSMUST00000183495 199 ntBASIC29.64■■■□□ 2.34
Frmpd3A0A140LIW3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Frmpd3A0A140LIW3 Gm45364-201ENSMUST00000210883 159 ntBASIC29.63■■■□□ 2.33
Frmpd3A0A140LIW3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
Frmpd3A0A140LIW3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.62■■■□□ 2.33
Frmpd3A0A140LIW3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Frmpd3A0A140LIW3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
Frmpd3A0A140LIW3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC29.6■■■□□ 2.33
Frmpd3A0A140LIW3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC29.6■■■□□ 2.33
Frmpd3A0A140LIW3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Frmpd3A0A140LIW3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Frmpd3A0A140LIW3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Frmpd3A0A140LIW3 Gm7332-201ENSMUST00000118351 454 ntBASIC29.58■■■□□ 2.33
Frmpd3A0A140LIW3 Gm16437-201ENSMUST00000025669 507 ntBASIC29.58■■■□□ 2.33
Frmpd3A0A140LIW3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Frmpd3A0A140LIW3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Frmpd3A0A140LIW3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Frmpd3A0A140LIW3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC29.55■■■□□ 2.32
Frmpd3A0A140LIW3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Frmpd3A0A140LIW3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.53■■■□□ 2.32
Frmpd3A0A140LIW3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Frmpd3A0A140LIW3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Frmpd3A0A140LIW3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Frmpd3A0A140LIW3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
Frmpd3A0A140LIW3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Frmpd3A0A140LIW3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
Frmpd3A0A140LIW3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Frmpd3A0A140LIW3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
Frmpd3A0A140LIW3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
Frmpd3A0A140LIW3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Frmpd3A0A140LIW3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Frmpd3A0A140LIW3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Frmpd3A0A140LIW3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Frmpd3A0A140LIW3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.48■■■□□ 2.31
Frmpd3A0A140LIW3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Frmpd3A0A140LIW3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Frmpd3A0A140LIW3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Frmpd3A0A140LIW3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Frmpd3A0A140LIW3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
Frmpd3A0A140LIW3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29.44■■■□□ 2.3
Frmpd3A0A140LIW3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
Frmpd3A0A140LIW3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms