Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav9n-2A0A0G2JDP3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9n-2A0A0G2JDP3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9n-2A0A0G2JDP3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9n-2A0A0G2JDP3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9n-2A0A0G2JDP3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9n-2A0A0G2JDP3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9n-2A0A0G2JDP3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9n-2A0A0G2JDP3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9n-2A0A0G2JDP3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.13■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9n-2A0A0G2JDP3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trav9n-2A0A0G2JDP3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-2A0A0G2JDP3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav9n-2A0A0G2JDP3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Gm30023-201ENSMUST00000197970 889 ntBASIC17.06■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9n-2A0A0G2JDP3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.05■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9n-2A0A0G2JDP3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms