Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14n-2A0A0G2JDF5 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.41■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14n-2A0A0G2JDF5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav14n-2A0A0G2JDF5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.36■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Trav14n-2A0A0G2JDF5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav14n-2A0A0G2JDF5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav14n-2A0A0G2JDF5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav14n-2A0A0G2JDF5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav14n-2A0A0G2JDF5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-2A0A0G2JDF5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav14n-2A0A0G2JDF5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14n-2A0A0G2JDF5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14n-2A0A0G2JDF5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav14n-2A0A0G2JDF5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14n-2A0A0G2JDF5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14n-2A0A0G2JDF5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms