Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav21-dv12A0A075B6C4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav21-dv12A0A075B6C4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav21-dv12A0A075B6C4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav21-dv12A0A075B6C4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav21-dv12A0A075B6C4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav21-dv12A0A075B6C4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav21-dv12A0A075B6C4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav21-dv12A0A075B6C4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav21-dv12A0A075B6C4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trav21-dv12A0A075B6C4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav21-dv12A0A075B6C4 Gm24970-201ENSMUST00000175582 82 ntBASIC18.2■□□□□ 0.5
Trav21-dv12A0A075B6C4 Gm45855-201ENSMUST00000212546 880 ntBASIC18.2■□□□□ 0.5
Trav21-dv12A0A075B6C4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav21-dv12A0A075B6C4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav21-dv12A0A075B6C4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav21-dv12A0A075B6C4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav21-dv12A0A075B6C4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav21-dv12A0A075B6C4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav21-dv12A0A075B6C4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav21-dv12A0A075B6C4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav21-dv12A0A075B6C4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trav21-dv12A0A075B6C4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav21-dv12A0A075B6C4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav21-dv12A0A075B6C4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav21-dv12A0A075B6C4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav21-dv12A0A075B6C4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.15■□□□□ 0.5
Trav21-dv12A0A075B6C4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav21-dv12A0A075B6C4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.15■□□□□ 0.5
Trav21-dv12A0A075B6C4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav21-dv12A0A075B6C4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.14■□□□□ 0.49
Trav21-dv12A0A075B6C4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.14■□□□□ 0.49
Trav21-dv12A0A075B6C4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav21-dv12A0A075B6C4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav21-dv12A0A075B6C4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav21-dv12A0A075B6C4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav21-dv12A0A075B6C4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav21-dv12A0A075B6C4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav21-dv12A0A075B6C4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav21-dv12A0A075B6C4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.12■□□□□ 0.49
Trav21-dv12A0A075B6C4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav21-dv12A0A075B6C4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trav21-dv12A0A075B6C4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav21-dv12A0A075B6C4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav21-dv12A0A075B6C4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav21-dv12A0A075B6C4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav21-dv12A0A075B6C4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav21-dv12A0A075B6C4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav21-dv12A0A075B6C4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trav21-dv12A0A075B6C4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav21-dv12A0A075B6C4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav21-dv12A0A075B6C4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav21-dv12A0A075B6C4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trav21-dv12A0A075B6C4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav21-dv12A0A075B6C4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav21-dv12A0A075B6C4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav21-dv12A0A075B6C4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Trav21-dv12A0A075B6C4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trav21-dv12A0A075B6C4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav21-dv12A0A075B6C4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav21-dv12A0A075B6C4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav21-dv12A0A075B6C4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav21-dv12A0A075B6C4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav21-dv12A0A075B6C4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav21-dv12A0A075B6C4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav21-dv12A0A075B6C4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav21-dv12A0A075B6C4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav21-dv12A0A075B6C4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav21-dv12A0A075B6C4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.02■□□□□ 0.48
Trav21-dv12A0A075B6C4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav21-dv12A0A075B6C4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav21-dv12A0A075B6C4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms