Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-4A0A075B6B4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.38■□□□□ 0.53
Trav6-4A0A075B6B4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-4A0A075B6B4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-4A0A075B6B4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-4A0A075B6B4 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.35■□□□□ 0.53
Trav6-4A0A075B6B4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-4A0A075B6B4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-4A0A075B6B4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trav6-4A0A075B6B4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-4A0A075B6B4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-4A0A075B6B4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav6-4A0A075B6B4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-4A0A075B6B4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-4A0A075B6B4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav6-4A0A075B6B4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-4A0A075B6B4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-4A0A075B6B4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-4A0A075B6B4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-4A0A075B6B4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-4A0A075B6B4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-4A0A075B6B4 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.32■□□□□ 0.52
Trav6-4A0A075B6B4 Nkain2-201ENSMUST00000092602 558 ntBASIC18.32■□□□□ 0.52
Trav6-4A0A075B6B4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-4A0A075B6B4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-4A0A075B6B4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav6-4A0A075B6B4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav6-4A0A075B6B4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-4A0A075B6B4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trav6-4A0A075B6B4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav6-4A0A075B6B4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.3■□□□□ 0.52
Trav6-4A0A075B6B4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-4A0A075B6B4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-4A0A075B6B4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav6-4A0A075B6B4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-4A0A075B6B4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-4A0A075B6B4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Trav6-4A0A075B6B4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-4A0A075B6B4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-4A0A075B6B4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-4A0A075B6B4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-4A0A075B6B4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-4A0A075B6B4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav6-4A0A075B6B4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-4A0A075B6B4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-4A0A075B6B4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-4A0A075B6B4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav6-4A0A075B6B4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-4A0A075B6B4 Gm30023-201ENSMUST00000197970 889 ntBASIC18.25■□□□□ 0.51
Trav6-4A0A075B6B4 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.25■□□□□ 0.51
Trav6-4A0A075B6B4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-4A0A075B6B4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-4A0A075B6B4 Gm6821-201ENSMUST00000107540 542 ntBASIC18.24■□□□□ 0.51
Trav6-4A0A075B6B4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-4A0A075B6B4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-4A0A075B6B4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Trav6-4A0A075B6B4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.23■□□□□ 0.51
Trav6-4A0A075B6B4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-4A0A075B6B4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-4A0A075B6B4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-4A0A075B6B4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav6-4A0A075B6B4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Trav6-4A0A075B6B4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-4A0A075B6B4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-4A0A075B6B4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-4A0A075B6B4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Trav6-4A0A075B6B4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-4A0A075B6B4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-4A0A075B6B4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-4A0A075B6B4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-4A0A075B6B4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav6-4A0A075B6B4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trav6-4A0A075B6B4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-4A0A075B6B4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-4A0A075B6B4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-4A0A075B6B4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-4A0A075B6B4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-4A0A075B6B4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-4A0A075B6B4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-4A0A075B6B4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-4A0A075B6B4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trav6-4A0A075B6B4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-4A0A075B6B4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav6-4A0A075B6B4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.15■□□□□ 0.5
Trav6-4A0A075B6B4 Gm8503-201ENSMUST00000118131 455 ntBASIC18.15■□□□□ 0.5
Trav6-4A0A075B6B4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-4A0A075B6B4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-4A0A075B6B4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-4A0A075B6B4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.14■□□□□ 0.49
Trav6-4A0A075B6B4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-4A0A075B6B4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav6-4A0A075B6B4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.13■□□□□ 0.49
Trav6-4A0A075B6B4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-4A0A075B6B4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav6-4A0A075B6B4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-4A0A075B6B4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav6-4A0A075B6B4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-4A0A075B6B4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-4A0A075B6B4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.12■□□□□ 0.49
Trav6-4A0A075B6B4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms