Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav9d-3A0A075B695 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9d-3A0A075B695 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trav9d-3A0A075B695 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav9d-3A0A075B695 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9d-3A0A075B695 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9d-3A0A075B695 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.9■□□□□ 0.3
Trav9d-3A0A075B695 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.9■□□□□ 0.3
Trav9d-3A0A075B695 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.89■□□□□ 0.29
Trav9d-3A0A075B695 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9d-3A0A075B695 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9d-3A0A075B695 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.88■□□□□ 0.29
Trav9d-3A0A075B695 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9d-3A0A075B695 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav9d-3A0A075B695 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Trav9d-3A0A075B695 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9d-3A0A075B695 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav9d-3A0A075B695 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-3A0A075B695 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-3A0A075B695 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-3A0A075B695 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-3A0A075B695 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-3A0A075B695 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-3A0A075B695 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-3A0A075B695 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-3A0A075B695 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-3A0A075B695 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-3A0A075B695 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-3A0A075B695 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-3A0A075B695 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav9d-3A0A075B695 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav9d-3A0A075B695 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-3A0A075B695 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-3A0A075B695 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9d-3A0A075B695 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9d-3A0A075B695 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-3A0A075B695 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-3A0A075B695 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-3A0A075B695 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9d-3A0A075B695 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav9d-3A0A075B695 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9d-3A0A075B695 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-3A0A075B695 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-3A0A075B695 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-3A0A075B695 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-3A0A075B695 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9d-3A0A075B695 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav9d-3A0A075B695 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-3A0A075B695 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-3A0A075B695 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-3A0A075B695 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-3A0A075B695 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-3A0A075B695 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9d-3A0A075B695 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav9d-3A0A075B695 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav9d-3A0A075B695 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav9d-3A0A075B695 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-3A0A075B695 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9d-3A0A075B695 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav9d-3A0A075B695 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9d-3A0A075B695 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9d-3A0A075B695 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9d-3A0A075B695 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav9d-3A0A075B695 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9d-3A0A075B695 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9d-3A0A075B695 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav9d-3A0A075B695 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav9d-3A0A075B695 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav9d-3A0A075B695 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav9d-3A0A075B695 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9d-3A0A075B695 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9d-3A0A075B695 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9d-3A0A075B695 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9d-3A0A075B695 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Trav9d-3A0A075B695 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav9d-3A0A075B695 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9d-3A0A075B695 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9d-3A0A075B695 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9d-3A0A075B695 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9d-3A0A075B695 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9d-3A0A075B695 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.71■□□□□ 0.26
Trav9d-3A0A075B695 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-3A0A075B695 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-3A0A075B695 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9d-3A0A075B695 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trav9d-3A0A075B695 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav9d-3A0A075B695 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9d-3A0A075B695 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav9d-3A0A075B695 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9d-3A0A075B695 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav9d-3A0A075B695 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav9d-3A0A075B695 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms