Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13-2A0A075B649 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Trav13-2A0A075B649 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trav13-2A0A075B649 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-2A0A075B649 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-2A0A075B649 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-2A0A075B649 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-2A0A075B649 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-2A0A075B649 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trav13-2A0A075B649 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-2A0A075B649 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav13-2A0A075B649 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-2A0A075B649 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13-2A0A075B649 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13-2A0A075B649 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-2A0A075B649 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13-2A0A075B649 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13-2A0A075B649 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.86■□□□□ 0.13
Trav13-2A0A075B649 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13-2A0A075B649 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-2A0A075B649 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-2A0A075B649 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav13-2A0A075B649 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-2A0A075B649 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-2A0A075B649 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-2A0A075B649 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-2A0A075B649 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13-2A0A075B649 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-2A0A075B649 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-2A0A075B649 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-2A0A075B649 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-2A0A075B649 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav13-2A0A075B649 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trav13-2A0A075B649 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-2A0A075B649 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-2A0A075B649 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-2A0A075B649 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-2A0A075B649 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-2A0A075B649 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.81■□□□□ 0.12
Trav13-2A0A075B649 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-2A0A075B649 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-2A0A075B649 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-2A0A075B649 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-2A0A075B649 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-2A0A075B649 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trav13-2A0A075B649 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav13-2A0A075B649 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-2A0A075B649 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav13-2A0A075B649 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-2A0A075B649 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav13-2A0A075B649 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-2A0A075B649 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav13-2A0A075B649 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav13-2A0A075B649 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-2A0A075B649 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Trav13-2A0A075B649 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-2A0A075B649 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-2A0A075B649 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-2A0A075B649 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-2A0A075B649 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav13-2A0A075B649 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trav13-2A0A075B649 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-2A0A075B649 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-2A0A075B649 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav13-2A0A075B649 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav13-2A0A075B649 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-2A0A075B649 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-2A0A075B649 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-2A0A075B649 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav13-2A0A075B649 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav13-2A0A075B649 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-2A0A075B649 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav13-2A0A075B649 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Trav13-2A0A075B649 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-2A0A075B649 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-2A0A075B649 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.74■□□□□ 0.11
Trav13-2A0A075B649 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13-2A0A075B649 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13-2A0A075B649 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13-2A0A075B649 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav13-2A0A075B649 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13-2A0A075B649 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13-2A0A075B649 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13-2A0A075B649 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trav13-2A0A075B649 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-2A0A075B649 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-2A0A075B649 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-2A0A075B649 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trav13-2A0A075B649 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-2A0A075B649 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-2A0A075B649 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-2A0A075B649 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms