Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav9n-4A0A075B631 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9n-4A0A075B631 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9n-4A0A075B631 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav9n-4A0A075B631 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9n-4A0A075B631 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.22■□□□□ 0.19
Trav9n-4A0A075B631 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav9n-4A0A075B631 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav9n-4A0A075B631 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9n-4A0A075B631 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9n-4A0A075B631 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9n-4A0A075B631 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav9n-4A0A075B631 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9n-4A0A075B631 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9n-4A0A075B631 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9n-4A0A075B631 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav9n-4A0A075B631 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9n-4A0A075B631 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9n-4A0A075B631 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav9n-4A0A075B631 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9n-4A0A075B631 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9n-4A0A075B631 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9n-4A0A075B631 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9n-4A0A075B631 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.16■□□□□ 0.18
Trav9n-4A0A075B631 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav9n-4A0A075B631 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9n-4A0A075B631 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav9n-4A0A075B631 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9n-4A0A075B631 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav9n-4A0A075B631 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.14■□□□□ 0.17
Trav9n-4A0A075B631 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.14■□□□□ 0.17
Trav9n-4A0A075B631 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9n-4A0A075B631 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav9n-4A0A075B631 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9n-4A0A075B631 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9n-4A0A075B631 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9n-4A0A075B631 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav9n-4A0A075B631 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9n-4A0A075B631 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9n-4A0A075B631 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav9n-4A0A075B631 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9n-4A0A075B631 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav9n-4A0A075B631 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav9n-4A0A075B631 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9n-4A0A075B631 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav9n-4A0A075B631 Zfp131-205ENSMUST00000223812 663 ntBASIC16.1■□□□□ 0.17
Trav9n-4A0A075B631 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav9n-4A0A075B631 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trav9n-4A0A075B631 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.08■□□□□ 0.16
Trav9n-4A0A075B631 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9n-4A0A075B631 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav9n-4A0A075B631 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9n-4A0A075B631 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-4A0A075B631 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav9n-4A0A075B631 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav9n-4A0A075B631 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav9n-4A0A075B631 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-4A0A075B631 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-4A0A075B631 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trav9n-4A0A075B631 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9n-4A0A075B631 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav9n-4A0A075B631 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9n-4A0A075B631 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav9n-4A0A075B631 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9n-4A0A075B631 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav9n-4A0A075B631 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9n-4A0A075B631 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9n-4A0A075B631 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9n-4A0A075B631 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9n-4A0A075B631 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.05■□□□□ 0.16
Trav9n-4A0A075B631 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9n-4A0A075B631 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav9n-4A0A075B631 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9n-4A0A075B631 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9n-4A0A075B631 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-4A0A075B631 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-4A0A075B631 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-4A0A075B631 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-4A0A075B631 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav9n-4A0A075B631 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9n-4A0A075B631 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav9n-4A0A075B631 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Trav9n-4A0A075B631 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-4A0A075B631 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-4A0A075B631 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav9n-4A0A075B631 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav9n-4A0A075B631 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9n-4A0A075B631 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9n-4A0A075B631 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.02■□□□□ 0.16
Trav9n-4A0A075B631 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms