Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm27786-201ENSMUST00000184337 70 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Mir6405-201ENSMUST00000184584 124 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm28113-201ENSMUST00000188280 229 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm28384-201ENSMUST00000189079 463 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm43142-201ENSMUST00000198670 361 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm45409-201ENSMUST00000211486 252 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm30534-201ENSMUST00000217928 207 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim58Q5NCC9 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm24928-201ENSMUST00000083399 107 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm25897-201ENSMUST00000083709 107 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm23431-201ENSMUST00000104006 107 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm14591-201ENSMUST00000120407 518 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm12042-201ENSMUST00000120479 301 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm16412-201ENSMUST00000121602 273 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm10177-202ENSMUST00000161698 207 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Mir7578-201ENSMUST00000183455 82 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm28847-201ENSMUST00000186778 700 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm44058-201ENSMUST00000204335 467 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm45105-201ENSMUST00000207824 397 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm10088-201ENSMUST00000074116 423 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 AF357428-201ENSMUST00000083815 69 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.42□□□□□ -1.86
Trim58Q5NCC9 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trim58Q5NCC9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm12787-201ENSMUST00000119234 396 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm11625-201ENSMUST00000119535 296 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm14562-201ENSMUST00000129885 543 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm24138-201ENSMUST00000157572 114 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm24082-201ENSMUST00000175175 83 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm27342-201ENSMUST00000183530 109 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm27755-201ENSMUST00000184623 132 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm37104-201ENSMUST00000193278 196 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm44050-201ENSMUST00000204263 527 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Mir421-201ENSMUST00000083575 76 ntBASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Trim58Q5NCC9 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.4□□□□□ -1.86
Trim58Q5NCC9 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Trim58Q5NCC9 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.4□□□□□ -1.86
Trim58Q5NCC9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm11843-201ENSMUST00000118984 425 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm11943-201ENSMUST00000119473 327 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm12819-201ENSMUST00000122223 629 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm3102-201ENSMUST00000164236 489 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm17064-201ENSMUST00000167690 452 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm28560-201ENSMUST00000186091 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm28334-201ENSMUST00000186653 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm28495-201ENSMUST00000188452 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm28925-201ENSMUST00000188586 168 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm28232-201ENSMUST00000188683 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm28481-201ENSMUST00000189231 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm29059-201ENSMUST00000191534 315 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms