Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm22473-201ENSMUST00000104114 132 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm23226-201ENSMUST00000116927 103 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm13478-201ENSMUST00000118312 413 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm15206-201ENSMUST00000119143 454 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm12806-201ENSMUST00000119384 268 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm15106-201ENSMUST00000119691 821 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm11388-201ENSMUST00000120908 159 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm22263-201ENSMUST00000180060 104 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm43524-201ENSMUST00000197278 298 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm8132-201ENSMUST00000204938 640 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm29884-201ENSMUST00000218403 453 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm23412-201ENSMUST00000083017 107 ntBASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Rnft1Q9DCN7 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm23014-201ENSMUST00000104144 130 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm22899-201ENSMUST00000104540 131 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm11830-201ENSMUST00000120175 561 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm14577-201ENSMUST00000121134 256 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm23213-201ENSMUST00000122715 313 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm6956-201ENSMUST00000134724 546 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm13092-201ENSMUST00000136346 260 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm25278-201ENSMUST00000157267 120 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm24439-201ENSMUST00000157894 117 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Mir3112-201ENSMUST00000175431 82 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm26430-201ENSMUST00000178054 107 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm22448-201ENSMUST00000179254 107 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Mir6963-201ENSMUST00000183535 71 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Mir6393-201ENSMUST00000183709 94 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Mir6943-201ENSMUST00000185186 66 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm43739-201ENSMUST00000198294 307 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Mir6994-201ENSMUST00000198985 73 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm4734-201ENSMUST00000200117 777 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Mir7227-201ENSMUST00000200408 59 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 AC163033.1-201ENSMUST00000218608 157 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Gm23848-201ENSMUST00000083826 106 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Rnft1Q9DCN7 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Rnft1Q9DCN7 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Rnft1Q9DCN7 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Rnft1Q9DCN7 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Rnft1Q9DCN7 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Rnft1Q9DCN7 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Gm24160-201ENSMUST00000104594 126 ntBASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Gm15752-201ENSMUST00000117427 394 ntBASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Gm13557-201ENSMUST00000120771 382 ntBASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Gm10444-201ENSMUST00000126708 148 ntBASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Gm23513-201ENSMUST00000158181 133 ntBASIC4.08□□□□□ -1.76
Rnft1Q9DCN7 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 211 ms