Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mir3964-201ENSMUST00000174898 74 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Mir5098-201ENSMUST00000175320 82 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm36934-201ENSMUST00000192007 306 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm18964-201ENSMUST00000193013 563 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm44011-201ENSMUST00000203336 394 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm45614-201ENSMUST00000209994 721 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm19219-201ENSMUST00000215863 724 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm23848-201ENSMUST00000083826 106 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Olfr713-201ENSMUST00000098139 975 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm11625-201ENSMUST00000119535 296 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm11430-201ENSMUST00000121317 217 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm24059-201ENSMUST00000157493 312 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm10357-201ENSMUST00000159886 264 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm20462-201ENSMUST00000172623 408 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm11395-201ENSMUST00000181011 499 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm5001-201ENSMUST00000204361 331 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm45031-201ENSMUST00000206800 288 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm44609-201ENSMUST00000207157 460 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm19126-201ENSMUST00000207896 509 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm22740-201ENSMUST00000083439 109 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Brf1Q8CFK2 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm24951-201ENSMUST00000102182 109 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm25537-201ENSMUST00000103851 109 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm25169-201ENSMUST00000104190 129 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm22676-201ENSMUST00000116972 129 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm11429-201ENSMUST00000119089 144 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm16428-201ENSMUST00000121193 723 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm15263-201ENSMUST00000121556 642 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm24810-201ENSMUST00000175317 70 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm28141-201ENSMUST00000186676 342 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm37399-201ENSMUST00000195224 416 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm44720-201ENSMUST00000206076 260 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm45539-201ENSMUST00000210313 428 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 AC163295.1-201ENSMUST00000227840 314 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Brf1Q8CFK2 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 190.2 ms