Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm21638-201ENSMUST00000179473 836 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm25412-201ENSMUST00000180258 107 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm27817-201ENSMUST00000184302 233 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm29524-201ENSMUST00000190819 699 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm18403-201ENSMUST00000192907 529 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm43239-201ENSMUST00000200131 201 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm44727-201ENSMUST00000204225 451 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm45400-201ENSMUST00000211603 653 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm23615-201ENSMUST00000082602 65 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm22023-201ENSMUST00000104354 130 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm24403-201ENSMUST00000104616 130 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm13731-201ENSMUST00000117332 196 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm13087-201ENSMUST00000118298 256 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm14804-201ENSMUST00000122322 508 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm25979-201ENSMUST00000157177 138 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm24240-201ENSMUST00000157785 135 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm25413-201ENSMUST00000158544 312 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm6395-201ENSMUST00000167639 691 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm21894-201ENSMUST00000179631 546 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm19257-201ENSMUST00000186121 183 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm42958-201ENSMUST00000197595 318 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm43004-201ENSMUST00000201872 703 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm45860-201ENSMUST00000212700 334 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm23447-201ENSMUST00000082798 163 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.45□□□□□ -1.86
Trim58Q5NCC9 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm11488-201ENSMUST00000117277 863 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm13614-201ENSMUST00000117306 503 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm11285-201ENSMUST00000118443 322 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm13640-201ENSMUST00000118445 264 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm11389-201ENSMUST00000121407 430 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm14907-201ENSMUST00000121948 854 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm15878-201ENSMUST00000127561 306 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm23754-201ENSMUST00000157576 63 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm3470-201ENSMUST00000160819 420 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm29452-201ENSMUST00000187996 313 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm28860-201ENSMUST00000188103 313 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm44282-201ENSMUST00000203199 190 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm44634-201ENSMUST00000206119 152 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim58Q5NCC9 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm23455-201ENSMUST00000083331 100 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.44□□□□□ -1.86
Trim58Q5NCC9 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm24127-201ENSMUST00000104110 130 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm11221-201ENSMUST00000117230 597 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm11407-201ENSMUST00000120362 1058 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm22651-201ENSMUST00000157872 94 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm17187-201ENSMUST00000164622 410 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Gm17154-201ENSMUST00000165748 431 ntBASIC3.43□□□□□ -1.86
Trim58Q5NCC9 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms