Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm23546-201ENSMUST00000158211 137 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm20526-201ENSMUST00000173416 158 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm22290-201ENSMUST00000177655 107 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm22583-201ENSMUST00000178031 107 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm23660-201ENSMUST00000178362 79 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm24088-201ENSMUST00000179100 79 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm23523-201ENSMUST00000180190 107 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Mir7056-201ENSMUST00000183776 59 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm8296-201ENSMUST00000185597 524 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm28385-201ENSMUST00000185671 292 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm43214-201ENSMUST00000199242 352 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm6303-201ENSMUST00000210123 471 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm23464-201ENSMUST00000083145 147 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Mir342-201ENSMUST00000083502 99 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm22778-201ENSMUST00000104090 128 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm13664-201ENSMUST00000117304 345 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm13378-201ENSMUST00000117483 336 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm12112-201ENSMUST00000117772 231 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm14578-201ENSMUST00000122166 391 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm24499-201ENSMUST00000158446 104 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm27490-201ENSMUST00000184754 128 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm2950-201ENSMUST00000185530 520 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm28976-201ENSMUST00000188070 144 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm28724-202ENSMUST00000194218 295 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm5552-201ENSMUST00000197149 515 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm45236-201ENSMUST00000208632 229 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm45365-201ENSMUST00000209489 256 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Mir30b-201ENSMUST00000083542 96 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.12□□□□□ -1.75
Rnft1Q9DCN7 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm25537-201ENSMUST00000103851 109 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm11633-201ENSMUST00000118176 444 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm12693-201ENSMUST00000121965 483 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm11229-201ENSMUST00000121993 437 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm26102-201ENSMUST00000157251 284 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm22336-201ENSMUST00000157719 107 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Mir5624-201ENSMUST00000176635 61 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm26180-201ENSMUST00000179942 107 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm44336-201ENSMUST00000203696 468 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm17989-201ENSMUST00000211543 412 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm2607-201ENSMUST00000212389 627 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Supt4b-201ENSMUST00000214434 351 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Rnft1Q9DCN7 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 217.9 ms