Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm24623-201ENSMUST00000082616 194 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm22364-201ENSMUST00000083097 98 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.53□□□□□ -1.69
Brf1Q8CFK2 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Brf1Q8CFK2 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm23697-201ENSMUST00000103897 110 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm15613-201ENSMUST00000118396 326 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm2182-201ENSMUST00000145243 663 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm24244-201ENSMUST00000157317 130 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm22290-201ENSMUST00000177655 107 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm22583-201ENSMUST00000178031 107 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm4076-201ENSMUST00000179230 965 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm21638-201ENSMUST00000179473 836 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm25156-201ENSMUST00000179809 79 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm27189-201ENSMUST00000184119 190 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm6929-201ENSMUST00000210930 468 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm2059-201ENSMUST00000212025 287 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm18507-201ENSMUST00000218855 525 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Brf1Q8CFK2 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 BC051076-202ENSMUST00000199477 2868 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm22834-201ENSMUST00000102021 79 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Mir690-201ENSMUST00000102110 109 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm15112-201ENSMUST00000120152 860 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm23078-201ENSMUST00000157848 148 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm45105-201ENSMUST00000207824 397 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm7675-201ENSMUST00000208828 686 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 mt-Td-201ENSMUST00000082404 70 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm3867-201ENSMUST00000086108 279 ntBASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Brf1Q8CFK2 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm12386-201ENSMUST00000117380 688 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm13650-201ENSMUST00000117729 433 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm11813-201ENSMUST00000118586 291 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm13082-201ENSMUST00000118877 561 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm25807-201ENSMUST00000122783 305 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm23024-201ENSMUST00000158770 292 ntBASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Brf1Q8CFK2 Gm20399-201ENSMUST00000174652 132 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 199.4 ms