Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubp1Q811S7 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubp1Q811S7 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm15526-201ENSMUST00000112504 204 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm14774-201ENSMUST00000117857 536 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm14560-201ENSMUST00000118672 375 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm15357-201ENSMUST00000119160 285 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm27510-201ENSMUST00000158214 64 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm23760-201ENSMUST00000158350 116 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm20698-201ENSMUST00000175657 233 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm26318-201ENSMUST00000176507 96 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Mir7012-201ENSMUST00000183900 64 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm37659-201ENSMUST00000194574 111 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm43529-201ENSMUST00000199178 412 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm45150-201ENSMUST00000206051 467 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm45403-201ENSMUST00000209453 276 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.97□□□□□ -1.61
Ubp1Q811S7 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubp1Q811S7 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.96□□□□□ -1.61
Ubp1Q811S7 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Ubp1Q811S7 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm12647-201ENSMUST00000118977 265 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm13430-201ENSMUST00000121366 288 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm12238-201ENSMUST00000127764 124 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm25907-201ENSMUST00000158486 125 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ubp1Q811S7 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm24264-201ENSMUST00000179835 94 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm27747-201ENSMUST00000184707 85 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm18177-201ENSMUST00000188373 404 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ubp1Q811S7 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm9442-201ENSMUST00000194242 319 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm43408-201ENSMUST00000198263 440 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm44853-201ENSMUST00000209070 250 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Gm25401-201ENSMUST00000082975 106 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Mir31-201ENSMUST00000083474 106 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.96□□□□□ -1.62
Ubp1Q811S7 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ubp1Q811S7 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm24338-201ENSMUST00000104205 127 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm15213-201ENSMUST00000122098 216 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm6265-201ENSMUST00000149263 231 ntBASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.95□□□□□ -1.62
Ubp1Q811S7 Gm24909-201ENSMUST00000157290 280 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 169.5 ms