Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.4□□□□□ -2.02
Scn2aA0A0J9YTW6 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm6215-201ENSMUST00000119297 1386 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm11221-201ENSMUST00000117230 597 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm12509-201ENSMUST00000118033 609 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm14821-201ENSMUST00000121975 435 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm23792-201ENSMUST00000122557 93 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm24773-201ENSMUST00000158513 99 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm20773-201ENSMUST00000178940 681 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm18327-201ENSMUST00000202426 830 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm44404-201ENSMUST00000203979 636 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm45072-201ENSMUST00000208673 929 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Platr25-208ENSMUST00000222602 939 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.4□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm14142-201ENSMUST00000117833 296 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm14008-201ENSMUST00000120483 274 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm25808-201ENSMUST00000122784 284 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm14333-201ENSMUST00000130484 264 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm16147-201ENSMUST00000162143 373 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm24111-201ENSMUST00000175491 97 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm25412-201ENSMUST00000180258 107 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm43264-201ENSMUST00000202284 325 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm26015-201ENSMUST00000104402 125 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm12587-201ENSMUST00000120180 427 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm24691-201ENSMUST00000157762 140 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm23583-201ENSMUST00000158533 289 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm28900-201ENSMUST00000185232 156 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm19257-201ENSMUST00000186121 183 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm37616-201ENSMUST00000193974 322 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm37418-201ENSMUST00000195031 274 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm25820-202ENSMUST00000197479 128 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm21089-201ENSMUST00000215843 325 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm30738-201ENSMUST00000221346 502 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Olfr203-201ENSMUST00000089305 924 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.39□□□□□ -2.03
Scn2aA0A0J9YTW6 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm13359-201ENSMUST00000119000 695 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm25642-201ENSMUST00000175137 66 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Mir3076-201ENSMUST00000175415 60 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm25198-201ENSMUST00000178574 110 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm28788-201ENSMUST00000189717 375 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm29558-201ENSMUST00000190134 375 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm37533-201ENSMUST00000193848 545 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm44548-201ENSMUST00000208929 192 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 Gm46234-201ENSMUST00000218702 259 ntBASIC2.38□□□□□ -2.03
Scn2aA0A0J9YTW6 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 165.7 ms