Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm9043-201ENSMUST00000119677 314 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm13973-201ENSMUST00000121371 894 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm3362-201ENSMUST00000148102 466 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm16490-201ENSMUST00000165299 351 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm24518-201ENSMUST00000180275 94 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm11395-201ENSMUST00000181011 499 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm11394-201ENSMUST00000181421 517 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm27699-201ENSMUST00000183553 180 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm19503-201ENSMUST00000187109 241 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm5368-201ENSMUST00000189012 589 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm8599-201ENSMUST00000193033 457 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 AC138290.2-201ENSMUST00000218822 369 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm8158-201ENSMUST00000219220 465 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm8249-201ENSMUST00000219225 465 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm8112-201ENSMUST00000219637 465 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm18116-201ENSMUST00000220920 537 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 CT010454.1-201ENSMUST00000225975 265 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Mir99a-201ENSMUST00000083596 65 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Rny1-201ENSMUST00000083767 112 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.15□□□□□ -1.75
Rnft1Q9DCN7 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm24578-201ENSMUST00000103970 129 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm24889-201ENSMUST00000104388 132 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm12871-201ENSMUST00000118758 438 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm22514-201ENSMUST00000122547 308 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm15905-201ENSMUST00000137042 298 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm23581-201ENSMUST00000158531 63 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm17109-201ENSMUST00000163985 358 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm27896-201ENSMUST00000175162 317 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm27402-201ENSMUST00000183890 120 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm29320-201ENSMUST00000185235 615 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm29179-202ENSMUST00000186138 615 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm29448-201ENSMUST00000186675 615 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm29314-201ENSMUST00000186800 615 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm28253-202ENSMUST00000187971 615 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm29169-201ENSMUST00000189835 615 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm9722-201ENSMUST00000194568 802 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm18100-201ENSMUST00000200897 452 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm44083-201ENSMUST00000203114 337 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm44059-201ENSMUST00000204048 351 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm45032-201ENSMUST00000205375 520 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm9068-201ENSMUST00000217393 455 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Gm46327-201ENSMUST00000218240 365 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Svet1-201ENSMUST00000209370 3940 ntBASIC4.14□□□□□ -1.75
Rnft1Q9DCN7 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm24067-201ENSMUST00000104514 85 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm13550-201ENSMUST00000118185 525 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm14591-201ENSMUST00000120407 518 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm13149-201ENSMUST00000122071 339 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm6969-201ENSMUST00000140065 342 ntBASIC4.13□□□□□ -1.75
Rnft1Q9DCN7 Gm23078-201ENSMUST00000157848 148 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms