Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Gm22578-201ENSMUST00000083730 107 ntBASIC3.53□□□□□ -1.84
Trim58Q5NCC9 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Trim58Q5NCC9 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm14833-201ENSMUST00000118345 1027 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm14238-201ENSMUST00000120227 323 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm16100-201ENSMUST00000120489 231 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm13511-201ENSMUST00000121167 363 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm15529-201ENSMUST00000121833 994 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm22478-201ENSMUST00000122570 154 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm24905-201ENSMUST00000158129 104 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Trim58Q5NCC9 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm28358-202ENSMUST00000189292 223 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm37000-201ENSMUST00000193058 428 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm24350-202ENSMUST00000198309 132 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Olfr815-201ENSMUST00000071557 951 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Gm24446-201ENSMUST00000083982 156 ntBASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim58Q5NCC9 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm24715-201ENSMUST00000102377 95 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm24376-201ENSMUST00000104399 127 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm14897-201ENSMUST00000118213 207 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm8260-201ENSMUST00000119230 353 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm23111-201ENSMUST00000122652 105 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm26088-201ENSMUST00000157896 131 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Snord53-201ENSMUST00000175146 78 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm22776-201ENSMUST00000178634 94 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm23767-201ENSMUST00000179278 94 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm6113-201ENSMUST00000180319 639 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Mir6411-201ENSMUST00000183556 108 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm8242-202ENSMUST00000193056 475 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm23448-201ENSMUST00000083151 104 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
Trim58Q5NCC9 Gm25097-201ENSMUST00000104042 145 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm14007-201ENSMUST00000118288 210 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm25807-201ENSMUST00000122783 305 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm22794-201ENSMUST00000157228 306 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm27330-201ENSMUST00000184689 132 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm24035-201ENSMUST00000082867 107 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Mir463-201ENSMUST00000093570 75 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.5□□□□□ -1.85
Trim58Q5NCC9 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm14898-201ENSMUST00000120202 645 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm12383-201ENSMUST00000120628 760 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm13555-201ENSMUST00000121668 319 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm17377-201ENSMUST00000165184 207 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms