Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm26156-201ENSMUST00000116999 123 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm14299-201ENSMUST00000117586 397 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm12095-201ENSMUST00000121962 816 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm25781-201ENSMUST00000122527 84 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm25292-201ENSMUST00000122797 322 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm25150-201ENSMUST00000157121 60 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm24905-201ENSMUST00000158129 104 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm25365-201ENSMUST00000158852 121 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm24737-201ENSMUST00000158861 100 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm23003-201ENSMUST00000179948 107 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm28267-201ENSMUST00000191093 265 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm38088-201ENSMUST00000195829 241 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm6510-201ENSMUST00000195916 574 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm43669-201ENSMUST00000198229 436 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm45590-201ENSMUST00000209715 262 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm23939-201ENSMUST00000082880 133 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm24522-201ENSMUST00000083964 108 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm22365-201ENSMUST00000093750 117 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.25□□□□□ -1.73
Trim9Q8C7M3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Mir147-201ENSMUST00000102354 79 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm22656-201ENSMUST00000104199 171 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm14125-201ENSMUST00000113442 680 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm8807-201ENSMUST00000179328 492 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm27760-201ENSMUST00000185048 114 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm28471-201ENSMUST00000185994 615 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm28785-201ENSMUST00000187478 379 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm33354-201ENSMUST00000195448 906 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Mir7682-201ENSMUST00000198467 58 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm44468-201ENSMUST00000199516 105 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm43083-201ENSMUST00000199594 476 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm45588-201ENSMUST00000211213 630 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm7751-201ENSMUST00000212868 709 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 AC113031.5-201ENSMUST00000227116 606 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm24626-201ENSMUST00000082621 161 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm23460-201ENSMUST00000083258 109 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim9Q8C7M3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm23273-201ENSMUST00000104058 135 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm6923-201ENSMUST00000118343 406 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm14517-201ENSMUST00000119040 337 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm16017-201ENSMUST00000119834 208 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm12691-201ENSMUST00000120186 456 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm25294-201ENSMUST00000122791 104 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm14364-201ENSMUST00000129209 267 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm22120-201ENSMUST00000175590 70 ntBASIC4.23□□□□□ -1.73
Trim9Q8C7M3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 144.2 ms