Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm13873-201ENSMUST00000119208 427 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm12815-201ENSMUST00000121737 135 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm13725-201ENSMUST00000122139 207 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm23752-201ENSMUST00000157584 115 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm22530-201ENSMUST00000158820 118 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Nron-204ENSMUST00000158971 370 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm27688-201ENSMUST00000183634 91 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm27694-201ENSMUST00000184740 86 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm27733-201ENSMUST00000184803 68 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm20368-201ENSMUST00000220716 301 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 AV026068-237ENSMUST00000226075 572 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Snord14e-201ENSMUST00000082857 90 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubp1Q811S7 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubp1Q811S7 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm25418-201ENSMUST00000104214 129 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm11698-201ENSMUST00000117948 455 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm13903-201ENSMUST00000120945 193 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm23759-201ENSMUST00000158351 268 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Mir6971-201ENSMUST00000183497 63 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm27521-201ENSMUST00000184022 64 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm29454-201ENSMUST00000190805 393 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm29813-201ENSMUST00000195856 447 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm18325-201ENSMUST00000203228 835 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm44776-201ENSMUST00000207212 381 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm45513-201ENSMUST00000210228 376 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm45860-201ENSMUST00000212700 334 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.01□□□□□ -1.61
Ubp1Q811S7 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Ubp1Q811S7 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ubp1Q811S7 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ubp1Q811S7 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ubp1Q811S7 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Ubp1Q811S7 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ubp1Q811S7 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5□□□□□ -1.61
Ubp1Q811S7 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ubp1Q811S7 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ubp1Q811S7 Gm23142-201ENSMUST00000101848 105 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm26240-201ENSMUST00000101893 105 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm14296-202ENSMUST00000108931 750 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm14175-201ENSMUST00000119835 241 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm14656-201ENSMUST00000120342 502 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm25967-201ENSMUST00000157168 147 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm7335-201ENSMUST00000172475 373 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm6214-201ENSMUST00000178845 541 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5□□□□□ -1.61
Ubp1Q811S7 Gm27999-201ENSMUST00000183539 193 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5□□□□□ -1.61
Ubp1Q811S7 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ubp1Q811S7 Gm38011-201ENSMUST00000193312 279 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm37030-201ENSMUST00000194254 295 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm18036-201ENSMUST00000195256 272 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm9379-201ENSMUST00000196790 646 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm45315-201ENSMUST00000209283 333 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm45660-201ENSMUST00000210267 151 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC5□□□□□ -1.61
Ubp1Q811S7 Gm45815-201ENSMUST00000220241 146 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC5□□□□□ -1.61
Ubp1Q811S7 AC154276.2-201ENSMUST00000227707 309 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ubp1Q811S7 n-R5s173-201ENSMUST00000082620 119 ntBASIC5□□□□□ -1.61
Ubp1Q811S7 Gm26330-201ENSMUST00000082817 104 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms