Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mir667-201ENSMUST00000102441 92 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm13555-201ENSMUST00000121668 319 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm14581-201ENSMUST00000121726 198 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Snrpert-201ENSMUST00000121967 279 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm25109-201ENSMUST00000122474 114 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm25979-201ENSMUST00000157177 138 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm28637-201ENSMUST00000179424 345 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Mir6413-201ENSMUST00000184049 108 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Mir7047-201ENSMUST00000184595 64 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm21489-201ENSMUST00000189668 818 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm28069-201ENSMUST00000189926 214 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm18384-201ENSMUST00000195974 808 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm44084-201ENSMUST00000203947 409 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm24533-201ENSMUST00000083138 196 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Mir465-201ENSMUST00000093563 74 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm12492-201ENSMUST00000117665 564 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm7429-201ENSMUST00000118664 348 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm13603-201ENSMUST00000119404 83 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm23777-201ENSMUST00000158994 259 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm6395-201ENSMUST00000167639 691 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm24819-201ENSMUST00000175094 166 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm43407-201ENSMUST00000199816 317 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm17893-201ENSMUST00000203017 770 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm44030-201ENSMUST00000204865 432 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm36776-201ENSMUST00000207006 203 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm2544-201ENSMUST00000222702 756 ntBASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Trim3Q9R1R2 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm22115-201ENSMUST00000103976 133 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm23923-201ENSMUST00000104108 133 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm23609-201ENSMUST00000104542 127 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm12902-201ENSMUST00000118389 322 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm13717-201ENSMUST00000119868 365 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm23034-201ENSMUST00000158001 147 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm28785-201ENSMUST00000187478 379 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm29389-201ENSMUST00000191562 352 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm5983-201ENSMUST00000197739 770 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm45146-201ENSMUST00000207108 221 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Gm7751-201ENSMUST00000212868 709 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim3Q9R1R2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 257.9 ms