Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Gm4734-201ENSMUST00000200117 777 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Gm18007-201ENSMUST00000205019 844 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Gm40692-201ENSMUST00000220411 491 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.05□□□□□ -1.6
Ubp1Q811S7 CT009713.6-201ENSMUST00000223615 294 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ubp1Q811S7 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ubp1Q811S7 Gm24706-201ENSMUST00000082806 137 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Gm10222-201ENSMUST00000088336 294 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubp1Q811S7 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubp1Q811S7 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.05□□□□□ -1.6
Ubp1Q811S7 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ubp1Q811S7 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.05□□□□□ -1.6
Ubp1Q811S7 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubp1Q811S7 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubp1Q811S7 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.05□□□□□ -1.6
Ubp1Q811S7 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubp1Q811S7 AC091683.1-201ENSMUST00000222307 2446 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm11600-201ENSMUST00000119592 240 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm12693-201ENSMUST00000121965 483 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm25861-201ENSMUST00000158251 109 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm25643-201ENSMUST00000158874 103 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Mir7020-201ENSMUST00000183787 70 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm7182-201ENSMUST00000193351 732 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm42459-201ENSMUST00000199679 742 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm5876-201ENSMUST00000203735 243 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm17999-201ENSMUST00000211568 542 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm8940-201ENSMUST00000212585 219 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 AC158606.1-201ENSMUST00000220078 325 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm23514-201ENSMUST00000082827 130 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm25260-201ENSMUST00000083053 134 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm23456-201ENSMUST00000083335 137 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ubp1Q811S7 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm23274-201ENSMUST00000104056 130 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm13650-201ENSMUST00000117729 433 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm7312-201ENSMUST00000118798 469 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm25341-201ENSMUST00000157461 268 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm23993-201ENSMUST00000157478 144 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm24501-201ENSMUST00000158452 62 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Mir6355-201ENSMUST00000183687 106 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Mir8106-201ENSMUST00000184520 139 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm34073-201ENSMUST00000195736 212 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm42647-201ENSMUST00000195939 459 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 AC164297.3-201ENSMUST00000224238 94 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Snora23-201ENSMUST00000082517 184 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm23055-201ENSMUST00000082805 94 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Mir20a-201ENSMUST00000083508 107 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Mir10a-201ENSMUST00000083585 110 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm19428-201ENSMUST00000220512 1995 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm7135-202ENSMUST00000191257 1905 ntBASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Ubp1Q811S7 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.02□□□□□ -1.61
Ubp1Q811S7 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubp1Q811S7 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 152.5 ms