Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm18433-202ENSMUST00000195682 196 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm44727-201ENSMUST00000204225 451 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm9712-201ENSMUST00000210842 311 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm9309-201ENSMUST00000223537 546 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm14825-201ENSMUST00000113538 701 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm14681-201ENSMUST00000118047 411 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm12656-201ENSMUST00000118149 577 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm14463-201ENSMUST00000121117 498 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm5958-201ENSMUST00000147698 297 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm23865-201ENSMUST00000157723 97 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Mir3112-201ENSMUST00000175431 82 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Mir8118-201ENSMUST00000183962 129 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm28591-201ENSMUST00000185259 183 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm29013-201ENSMUST00000187431 237 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm6510-201ENSMUST00000195916 574 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm18597-201ENSMUST00000209519 694 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Mir421-201ENSMUST00000083575 76 ntBASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim3Q9R1R2 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Trim3Q9R1R2 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.09□□□□□ -1.92
Trim3Q9R1R2 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Trim3Q9R1R2 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Mir599-201ENSMUST00000102378 88 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm15125-201ENSMUST00000116185 800 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm13873-201ENSMUST00000119208 427 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm23168-201ENSMUST00000157156 143 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm15946-201ENSMUST00000160654 423 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm17117-201ENSMUST00000163665 299 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm23053-201ENSMUST00000175136 96 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm22307-201ENSMUST00000180019 107 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm26988-201ENSMUST00000183296 945 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm42958-201ENSMUST00000197595 318 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm45530-201ENSMUST00000211658 225 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 CT009733.1-203ENSMUST00000224033 451 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Olfr815-201ENSMUST00000071557 951 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm23939-201ENSMUST00000082880 133 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.08□□□□□ -1.92
Trim3Q9R1R2 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim3Q9R1R2 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.07□□□□□ -1.92
Trim3Q9R1R2 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms