Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm25938-201ENSMUST00000104139 166 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm14448-201ENSMUST00000116383 210 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm15025-201ENSMUST00000118434 418 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm25047-201ENSMUST00000122667 104 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm5263-201ENSMUST00000163646 601 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm1833-201ENSMUST00000191608 682 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm43393-201ENSMUST00000200147 194 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Olfr844-201ENSMUST00000054106 930 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm23424-201ENSMUST00000103889 110 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm11285-201ENSMUST00000118443 322 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm12871-201ENSMUST00000118758 438 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm11483-201ENSMUST00000119839 247 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm13743-201ENSMUST00000121486 724 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm14840-201ENSMUST00000122135 594 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm16355-201ENSMUST00000128606 231 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm15279-201ENSMUST00000155593 288 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm25520-201ENSMUST00000158389 118 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm14527-201ENSMUST00000179300 639 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm27991-201ENSMUST00000184804 137 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm17937-201ENSMUST00000197908 742 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm43090-201ENSMUST00000202459 314 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm44865-201ENSMUST00000207240 531 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm7204-201ENSMUST00000062591 600 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm22971-201ENSMUST00000083305 97 ntBASIC2.57□□□□□ -2
Col4a4Q9QZR9 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Mir542-201ENSMUST00000102186 85 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Mir669n-201ENSMUST00000158636 54 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm8338-201ENSMUST00000163928 363 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col4a4Q9QZR9 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm27952-201ENSMUST00000184748 105 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm45071-201ENSMUST00000205353 571 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm45696-201ENSMUST00000212088 985 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col4a4Q9QZR9 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm6462-201ENSMUST00000081488 304 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.56□□□□□ -2
Col4a4Q9QZR9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col4a4Q9QZR9 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col4a4Q9QZR9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm13687-201ENSMUST00000119857 282 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm25109-201ENSMUST00000122474 114 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm22226-201ENSMUST00000157355 109 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm22192-201ENSMUST00000175128 85 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm23289-201ENSMUST00000175615 108 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm27733-201ENSMUST00000184803 68 ntBASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.55□□□□□ -2
Col4a4Q9QZR9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms