Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm29000-201ENSMUST00000185444 614 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm28204-201ENSMUST00000185934 614 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm28290-201ENSMUST00000186505 614 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm28161-201ENSMUST00000186669 614 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm28749-209ENSMUST00000189599 614 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm33163-201ENSMUST00000194504 614 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Mir3970-201ENSMUST00000199287 90 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm43730-201ENSMUST00000199863 372 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm43309-201ENSMUST00000200837 458 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm43925-201ENSMUST00000203498 206 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm26228-201ENSMUST00000082512 107 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm25080-201ENSMUST00000082526 107 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm22293-201ENSMUST00000083314 109 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Mir28a-201ENSMUST00000083560 86 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm25518-201ENSMUST00000083864 107 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Rnft1Q9DCN7 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Rnft1Q9DCN7 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.21□□□□□ -1.73
Rnft1Q9DCN7 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Rnft1Q9DCN7 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Rnft1Q9DCN7 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm23653-201ENSMUST00000116751 97 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm14428-201ENSMUST00000120408 822 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm12808-201ENSMUST00000120597 404 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm22791-201ENSMUST00000157232 145 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm25428-201ENSMUST00000157608 114 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm22842-201ENSMUST00000157709 118 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm22839-201ENSMUST00000158436 304 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm23638-201ENSMUST00000175073 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm23158-201ENSMUST00000175076 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm22907-201ENSMUST00000175198 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm22625-201ENSMUST00000175382 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm22875-201ENSMUST00000175449 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm25197-201ENSMUST00000175516 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm27857-201ENSMUST00000176930 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm26268-201ENSMUST00000177685 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm23681-201ENSMUST00000178821 126 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm27940-201ENSMUST00000184449 98 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm27694-201ENSMUST00000184740 86 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm28995-201ENSMUST00000186625 261 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm19641-201ENSMUST00000188432 417 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm44184-201ENSMUST00000204290 132 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm44853-201ENSMUST00000209070 250 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm23626-201ENSMUST00000082458 133 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm24042-201ENSMUST00000083114 103 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm23460-201ENSMUST00000083258 109 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm25008-201ENSMUST00000083809 81 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm42639-201ENSMUST00000197061 1871 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Rnft1Q9DCN7 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Gm26019-201ENSMUST00000104407 119 ntBASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Gm12691-201ENSMUST00000120186 456 ntBASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Gm12872-201ENSMUST00000121835 320 ntBASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rnft1Q9DCN7 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms