Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm13239-201ENSMUST00000119920 637 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm15379-201ENSMUST00000121224 648 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm23435-201ENSMUST00000157183 156 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm26348-201ENSMUST00000157528 240 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm22219-201ENSMUST00000157562 319 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm43505-201ENSMUST00000200579 139 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm43925-201ENSMUST00000203498 206 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm44295-201ENSMUST00000203805 437 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm6240-201ENSMUST00000208014 473 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm7540-201ENSMUST00000219764 926 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 AC116589.3-202ENSMUST00000221770 649 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 AC116589.6-201ENSMUST00000222252 649 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm3829-201ENSMUST00000222362 619 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm10042-201ENSMUST00000079884 78 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm6361-201ENSMUST00000091031 435 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm12509-201ENSMUST00000118033 609 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm14428-201ENSMUST00000120408 822 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm11982-201ENSMUST00000121480 314 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm13406-201ENSMUST00000121991 256 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm15899-201ENSMUST00000128586 238 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm25058-201ENSMUST00000157365 128 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm23312-201ENSMUST00000158774 102 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm27028-201ENSMUST00000182303 399 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm19427-201ENSMUST00000183619 208 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Trbv8-201ENSMUST00000194020 285 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Mir129b-201ENSMUST00000197461 65 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm44726-201ENSMUST00000203427 217 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm45553-201ENSMUST00000209929 507 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm9845-201ENSMUST00000056409 598 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Brf1Q8CFK2 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm22758-201ENSMUST00000102275 96 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm14558-201ENSMUST00000117458 381 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm7071-201ENSMUST00000120458 462 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm8224-201ENSMUST00000166178 497 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Mir713-201ENSMUST00000178651 108 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Mir7028-201ENSMUST00000185016 64 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm29335-201ENSMUST00000188361 459 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm19777-201ENSMUST00000191940 358 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm43804-201ENSMUST00000198280 456 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm42453-201ENSMUST00000200477 409 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm45796-201ENSMUST00000212483 114 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm18696-201ENSMUST00000220103 274 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm8231-201ENSMUST00000221617 783 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm22508-201ENSMUST00000082772 110 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms