Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Gm37523-201ENSMUST00000194901 412 ntBASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.13□□□□□ -1.91
Trim3Q9R1R2 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Gm17872-201ENSMUST00000222550 532 ntBASIC3.13□□□□□ -1.91
Trim3Q9R1R2 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.13□□□□□ -1.91
Trim3Q9R1R2 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trim3Q9R1R2 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim3Q9R1R2 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm25560-201ENSMUST00000104606 176 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm14731-201ENSMUST00000119216 376 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm29064-201ENSMUST00000187014 813 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm28917-201ENSMUST00000187294 237 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm28766-201ENSMUST00000191086 234 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm8023-201ENSMUST00000195298 903 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm42621-201ENSMUST00000198114 275 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm32381-201ENSMUST00000203192 476 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm44927-201ENSMUST00000207573 716 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm4987-201ENSMUST00000078326 408 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.12□□□□□ -1.91
Trim3Q9R1R2 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm16431-201ENSMUST00000117454 431 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm14845-201ENSMUST00000121259 306 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm25883-201ENSMUST00000157781 271 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm22766-201ENSMUST00000158372 99 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm2966-201ENSMUST00000166052 481 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm26866-201ENSMUST00000180414 802 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm18667-201ENSMUST00000186523 484 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm28466-201ENSMUST00000190678 659 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm43096-201ENSMUST00000196173 421 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm43227-201ENSMUST00000202239 677 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm5317-201ENSMUST00000204445 847 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm43954-201ENSMUST00000204634 544 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm19563-201ENSMUST00000222031 270 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm25131-201ENSMUST00000082653 151 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim3Q9R1R2 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Mir1198-201ENSMUST00000116995 121 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm13731-201ENSMUST00000117332 196 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm14880-201ENSMUST00000117581 292 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm7123-201ENSMUST00000117647 213 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm13678-201ENSMUST00000118926 340 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm24936-201ENSMUST00000122598 247 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm25295-201ENSMUST00000122794 306 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm23667-201ENSMUST00000157466 120 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm22910-201ENSMUST00000178568 132 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm6900-201ENSMUST00000178971 342 ntBASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim3Q9R1R2 Gm37288-201ENSMUST00000193963 334 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 177.3 ms