Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm45382-201ENSMUST00000210607 151 ntBASIC2.61□□□□□ -1.99
Col4a4Q9QZR9 Gm45814-201ENSMUST00000212646 775 ntBASIC2.61□□□□□ -1.99
Col4a4Q9QZR9 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.61□□□□□ -1.99
Col4a4Q9QZR9 Gm19540-201ENSMUST00000221843 810 ntBASIC2.61□□□□□ -1.99
Col4a4Q9QZR9 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.61□□□□□ -1.99
Col4a4Q9QZR9 AC154562.1-201ENSMUST00000226140 966 ntBASIC2.61□□□□□ -1.99
Col4a4Q9QZR9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC2.61□□□□□ -1.99
Col4a4Q9QZR9 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col4a4Q9QZR9 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Mir344e-201ENSMUST00000104677 66 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Mir6997-201ENSMUST00000184313 71 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm38356-201ENSMUST00000194313 408 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm21006-201ENSMUST00000196930 667 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm44521-201ENSMUST00000206469 217 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 AC154851.2-201ENSMUST00000222172 644 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm46389-201ENSMUST00000223199 392 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm15148-201ENSMUST00000117602 156 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm14768-201ENSMUST00000122126 678 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm12443-201ENSMUST00000122308 323 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm24177-201ENSMUST00000158927 131 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm15143-201ENSMUST00000178180 714 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm28466-201ENSMUST00000190678 659 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm38280-201ENSMUST00000192610 158 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm38311-201ENSMUST00000192945 165 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Trdv3-201ENSMUST00000198551 309 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm43841-201ENSMUST00000199491 586 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm44232-201ENSMUST00000204537 225 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Gm45105-201ENSMUST00000207824 397 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col4a4Q9QZR9 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col4a4Q9QZR9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Col4a4Q9QZR9 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
Col4a4Q9QZR9 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Col4a4Q9QZR9 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col4a4Q9QZR9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.59□□□□□ -2
Col4a4Q9QZR9 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC2.59□□□□□ -2
Col4a4Q9QZR9 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm23633-201ENSMUST00000175293 119 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.59□□□□□ -2
Col4a4Q9QZR9 Mir6363-201ENSMUST00000184880 114 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm29013-201ENSMUST00000187431 237 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm19224-201ENSMUST00000190477 793 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm9251-201ENSMUST00000197202 628 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm6590-201ENSMUST00000203343 687 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm19237-201ENSMUST00000205036 1132 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm4528-201ENSMUST00000207905 551 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.59□□□□□ -2
Col4a4Q9QZR9 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.59□□□□□ -2
Col4a4Q9QZR9 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC2.59□□□□□ -2
Col4a4Q9QZR9 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC2.59□□□□□ -2
Col4a4Q9QZR9 Gm24273-201ENSMUST00000102332 164 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm13588-201ENSMUST00000120026 135 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm24379-201ENSMUST00000122695 86 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm23441-201ENSMUST00000157268 127 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm22330-201ENSMUST00000158068 115 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm22947-201ENSMUST00000158559 91 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm37866-201ENSMUST00000191950 696 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm37934-201ENSMUST00000192902 402 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm42625-201ENSMUST00000198611 922 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm43384-201ENSMUST00000200569 637 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm44030-201ENSMUST00000204865 432 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm44585-201ENSMUST00000207150 607 ntBASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col4a4Q9QZR9 Gm23407-201ENSMUST00000082538 91 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 180.6 ms