Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm14566-201ENSMUST00000118915 321 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm15377-201ENSMUST00000119594 246 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm15364-201ENSMUST00000119618 585 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm26362-201ENSMUST00000158865 315 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm16290-201ENSMUST00000161175 474 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm22120-201ENSMUST00000175590 70 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm21815-201ENSMUST00000178213 664 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm22631-201ENSMUST00000179656 94 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm27588-201ENSMUST00000185096 263 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm38044-201ENSMUST00000192964 487 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm18971-201ENSMUST00000197240 374 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm43954-201ENSMUST00000204634 544 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm45162-201ENSMUST00000209013 618 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.67□□□□□ -1.66
Brf1Q8CFK2 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.67□□□□□ -1.66
Brf1Q8CFK2 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm25765-201ENSMUST00000104100 132 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm23744-201ENSMUST00000104231 149 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm14926-201ENSMUST00000120650 508 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm25666-201ENSMUST00000157702 107 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm25436-201ENSMUST00000158275 145 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm22851-201ENSMUST00000178741 94 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm25074-201ENSMUST00000178782 94 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm28255-201ENSMUST00000187101 694 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm19774-201ENSMUST00000190667 114 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm5731-201ENSMUST00000190969 481 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm42475-201ENSMUST00000201212 295 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm45735-201ENSMUST00000212779 319 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 AC102369.1-201ENSMUST00000218415 373 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Brf1Q8CFK2 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm6462-201ENSMUST00000081488 304 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm22572-201ENSMUST00000082985 105 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm26128-201ENSMUST00000083170 110 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Brf1Q8CFK2 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Brf1Q8CFK2 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.65□□□□□ -1.66
Brf1Q8CFK2 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.65□□□□□ -1.66
Brf1Q8CFK2 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Brf1Q8CFK2 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Brf1Q8CFK2 Gm25560-201ENSMUST00000104606 176 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm12568-201ENSMUST00000117362 624 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm14352-201ENSMUST00000119250 449 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm25434-201ENSMUST00000158278 167 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm7094-201ENSMUST00000178379 366 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm26335-201ENSMUST00000178449 107 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm21960-201ENSMUST00000181924 452 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm27834-201ENSMUST00000183427 125 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Mir7093-201ENSMUST00000184195 101 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm29610-201ENSMUST00000187749 453 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm45673-201ENSMUST00000210293 358 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Olfr936-202ENSMUST00000216912 937 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm9068-201ENSMUST00000217393 455 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm10264-201ENSMUST00000220589 429 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Ear14-201ENSMUST00000049559 468 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Gm23970-201ENSMUST00000083319 107 ntBASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Brf1Q8CFK2 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Brf1Q8CFK2 Gm14469-201ENSMUST00000118363 202 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms