Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm20656-201ENSMUST00000176925 518 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm43393-201ENSMUST00000200147 194 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm18015-201ENSMUST00000214879 316 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm7540-201ENSMUST00000219764 926 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm9818-201ENSMUST00000050900 255 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm8074-201ENSMUST00000095071 252 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 BC051076-202ENSMUST00000199477 2868 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm8260-201ENSMUST00000119230 353 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm23587-201ENSMUST00000157658 84 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm16111-201ENSMUST00000162128 285 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm27796-201ENSMUST00000183863 261 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm29524-201ENSMUST00000190819 699 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm8242-202ENSMUST00000193056 475 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm45063-201ENSMUST00000203726 472 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm5175-202ENSMUST00000219699 529 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.54□□□□□ -2
Scn2aA0A0J9YTW6 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Mir294-201ENSMUST00000104710 84 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm13080-201ENSMUST00000120556 420 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm11797-201ENSMUST00000121336 754 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm14562-201ENSMUST00000129885 543 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm16533-201ENSMUST00000140035 228 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm17166-201ENSMUST00000172006 431 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm28011-201ENSMUST00000184097 175 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Mir6905-201ENSMUST00000184228 70 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm17937-201ENSMUST00000197908 742 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm3010-201ENSMUST00000198805 448 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm44208-201ENSMUST00000205199 421 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm7422-201ENSMUST00000220115 640 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Scn2aA0A0J9YTW6 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
Scn2aA0A0J9YTW6 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm14771-201ENSMUST00000118249 203 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm11890-201ENSMUST00000119585 417 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm24780-201ENSMUST00000157635 143 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm22416-201ENSMUST00000158590 88 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm25119-201ENSMUST00000158815 88 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Mir3473c-201ENSMUST00000175262 81 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm25598-201ENSMUST00000179031 107 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Trbv7-201ENSMUST00000193339 402 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm44161-201ENSMUST00000203532 253 ntBASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Scn2aA0A0J9YTW6 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Scn2aA0A0J9YTW6 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Scn2aA0A0J9YTW6 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Scn2aA0A0J9YTW6 Gm24715-201ENSMUST00000102377 95 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms