Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubp1Q811S7 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm22468-201ENSMUST00000116680 120 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm26248-201ENSMUST00000116700 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm26137-201ENSMUST00000116701 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm26190-201ENSMUST00000116704 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm24617-201ENSMUST00000116705 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm25778-201ENSMUST00000116713 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm25774-201ENSMUST00000116717 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm22102-201ENSMUST00000116730 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm23177-201ENSMUST00000116784 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm24193-201ENSMUST00000116801 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm24744-201ENSMUST00000116833 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm24427-201ENSMUST00000116896 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm22346-201ENSMUST00000116918 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm23606-201ENSMUST00000116938 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm22029-201ENSMUST00000116940 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm26298-201ENSMUST00000116956 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm23844-201ENSMUST00000116959 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm24484-201ENSMUST00000117009 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm25347-201ENSMUST00000117026 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm22112-201ENSMUST00000117032 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm15010-201ENSMUST00000117153 407 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm16242-201ENSMUST00000117741 334 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm7657-201ENSMUST00000118851 666 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm14067-201ENSMUST00000119340 314 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm23887-201ENSMUST00000122683 172 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm14298-201ENSMUST00000139032 237 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm16356-201ENSMUST00000143300 169 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm27926-201ENSMUST00000157180 66 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm5139-201ENSMUST00000175943 249 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm22991-201ENSMUST00000178126 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm25754-201ENSMUST00000178653 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm22419-201ENSMUST00000178780 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm24802-201ENSMUST00000178897 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm25208-201ENSMUST00000178964 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm24567-201ENSMUST00000179294 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm23943-201ENSMUST00000179712 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm25228-201ENSMUST00000180121 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm23304-201ENSMUST00000180209 121 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm24415-201ENSMUST00000180218 107 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm7909-201ENSMUST00000182688 614 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Mir6418-201ENSMUST00000185075 115 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm28148-201ENSMUST00000186924 697 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm19177-201ENSMUST00000204520 613 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm45678-201ENSMUST00000210509 295 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm16419-201ENSMUST00000221057 625 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm23451-201ENSMUST00000083328 122 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm25411-201ENSMUST00000083760 151 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm25187-201ENSMUST00000083906 133 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.08□□□□□ -1.6
Ubp1Q811S7 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ubp1Q811S7 Gm36969-201ENSMUST00000194551 2809 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ubp1Q811S7 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Ubp1Q811S7 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ubp1Q811S7 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC5.07□□□□□ -1.6
Ubp1Q811S7 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm21033-201ENSMUST00000208590 2608 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm9343-201ENSMUST00000209016 2609 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm24789-201ENSMUST00000104282 131 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm11693-201ENSMUST00000119625 565 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm13396-201ENSMUST00000120617 271 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm12087-201ENSMUST00000121878 258 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.07□□□□□ -1.6
Ubp1Q811S7 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 179.5 ms