Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm12509-201ENSMUST00000118033 609 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm14627-201ENSMUST00000118931 567 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm13059-201ENSMUST00000119881 398 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm13692-201ENSMUST00000120774 371 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm12276-201ENSMUST00000121709 301 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm12998-201ENSMUST00000122445 789 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm22792-201ENSMUST00000157225 133 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm24060-201ENSMUST00000157494 95 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm7346-201ENSMUST00000169661 476 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm20648-201ENSMUST00000175815 328 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm27342-201ENSMUST00000183530 109 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Mir6408-201ENSMUST00000183643 91 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm29920-201ENSMUST00000206876 754 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm6842-201ENSMUST00000211361 390 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm2710-201ENSMUST00000073196 603 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm22864-201ENSMUST00000083950 130 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim3Q9R1R2 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trim3Q9R1R2 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm14811-201ENSMUST00000117070 117 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm12125-201ENSMUST00000117261 736 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm11693-201ENSMUST00000119625 565 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm14363-201ENSMUST00000122304 409 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm22960-201ENSMUST00000122517 104 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm25519-201ENSMUST00000158392 127 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm28146-201ENSMUST00000185517 701 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm29299-201ENSMUST00000185609 923 ntBASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim3Q9R1R2 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms