Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col4a4Q9QZR9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Col4a4Q9QZR9 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Col4a4Q9QZR9 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC2.67□□□□□ -1.98
Col4a4Q9QZR9 Gm24670-201ENSMUST00000104154 132 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm12401-201ENSMUST00000118435 228 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm12507-201ENSMUST00000119155 415 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm11943-201ENSMUST00000119473 327 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm28060-201ENSMUST00000191554 189 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm43104-201ENSMUST00000197234 311 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Mir142-201ENSMUST00000198092 64 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm43512-201ENSMUST00000198495 176 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm19253-201ENSMUST00000204279 307 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Mir322-201ENSMUST00000083484 95 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm14229-201ENSMUST00000121178 850 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Snora81-201ENSMUST00000157310 178 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm26187-201ENSMUST00000157693 101 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm24601-201ENSMUST00000157970 143 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm25332-201ENSMUST00000158038 105 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm28625-201ENSMUST00000188309 205 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm45778-201ENSMUST00000211959 153 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm7588-201ENSMUST00000216866 571 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Mir26a-1-201ENSMUST00000083579 90 ntBASIC2.66□□□□□ -1.98
Col4a4Q9QZR9 Gm7957-201ENSMUST00000207404 2602 ntBASIC2.65□□□□□ -1.98
Col4a4Q9QZR9 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.65□□□□□ -1.98
Col4a4Q9QZR9 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm3623-201ENSMUST00000173643 2747 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm13728-201ENSMUST00000117471 400 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm13756-201ENSMUST00000117618 222 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm17030-201ENSMUST00000167016 393 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm34091-201ENSMUST00000200875 604 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Col4a4Q9QZR9 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm37652-201ENSMUST00000195290 2095 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm14885-201ENSMUST00000117969 496 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm12090-201ENSMUST00000118692 758 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm14159-201ENSMUST00000119832 451 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm6565-201ENSMUST00000121217 438 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm25150-201ENSMUST00000157121 60 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm23897-201ENSMUST00000158110 158 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm28637-201ENSMUST00000179424 345 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm27786-201ENSMUST00000184337 70 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm36997-201ENSMUST00000195090 707 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm43427-201ENSMUST00000198188 331 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm44477-201ENSMUST00000199661 110 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Gm18043-201ENSMUST00000216741 739 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col4a4Q9QZR9 Snora23-201ENSMUST00000082517 184 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms