Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 ASPSCR1-213ENST00000582355 1246 ntTSL 518.69■□□□□ 0.582e-6■■■□□ 17.2
EXOSC5Q9NQT4 TTC3-217ENST00000481605 1540 ntTSL 518.13■□□□□ 0.492e-7■■■□□ 17.2
EXOSC5Q9NQT4 ASPSCR1-210ENST00000581608 2387 ntTSL 217.94■□□□□ 0.462e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-230ENST00000460829 1804 ntTSL 217.19■□□□□ 0.342e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-233ENST00000475721 1271 ntTSL 215.48■□□□□ 0.072e-6■■■□□ 17.2
EXOSC5Q9NQT4 ASPSCR1-204ENST00000577733 5503 ntTSL 215.47■□□□□ 0.072e-6■■■□□ 17.2
EXOSC5Q9NQT4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.26■□□□□ 0.032e-7■■■□□ 17.2
EXOSC5Q9NQT4 SLC17A9-204ENST00000459704 2015 ntTSL 315.04■□□□□ -02e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.77□□□□□ -0.042e-6■■■□□ 17.2
EXOSC5Q9NQT4 FAM169A-205ENST00000513277 803 ntTSL 314.66□□□□□ -0.062e-6■■■□□ 17.2
EXOSC5Q9NQT4 TTC3-209ENST00000438055 3606 ntTSL 514.64□□□□□ -0.072e-7■■■□□ 17.2
EXOSC5Q9NQT4 FAM169A-206ENST00000514200 751 ntTSL 414.58□□□□□ -0.082e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.092e-6■■■□□ 17.2
EXOSC5Q9NQT4 TTC3-207ENST00000418766 3771 ntTSL 514.44□□□□□ -0.12e-7■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.23□□□□□ -0.132e-6■■■□□ 17.2
EXOSC5Q9NQT4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.142e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.01□□□□□ -0.172e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.92□□□□□ -0.182e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.92□□□□□ -0.182e-6■■■□□ 17.2
EXOSC5Q9NQT4 ASPSCR1-216ENST00000583503 641 ntTSL 313.9□□□□□ -0.182e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.87□□□□□ -0.192e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.272e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.16□□□□□ -0.32e-6■■■□□ 17.2
EXOSC5Q9NQT4 TTC3-219ENST00000485402 3626 ntTSL 513.03□□□□□ -0.322e-7■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)12.85□□□□□ -0.352e-6■■■□□ 17.2
EXOSC5Q9NQT4 SLC17A9-205ENST00000483113 1624 ntTSL 312.8□□□□□ -0.362e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.45□□□□□ -0.422e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.12□□□□□ -0.472e-6■■■□□ 17.2
EXOSC5Q9NQT4 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)12.04□□□□□ -0.482e-6■■■□□ 17.2
EXOSC5Q9NQT4 ASPSCR1-205ENST00000578236 3277 ntTSL 211.9□□□□□ -0.52e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.9□□□□□ -0.52e-6■■■□□ 17.2
EXOSC5Q9NQT4 SLC17A9-207ENST00000488738 3992 ntTSL 211.28□□□□□ -0.62e-6■■■□□ 17.2
EXOSC5Q9NQT4 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.632e-6■■■□□ 17.2
EXOSC5Q9NQT4 TTC3-218ENST00000484047 1945 ntTSL 29.43□□□□□ -0.92e-6■■■□□ 17.2
EXOSC5Q9NQT4 EIF4G1-221ENST00000441154 4311 ntTSL 5 BASIC9.37□□□□□ -0.912e-6■■■□□ 17.2
EXOSC5Q9NQT4 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.032e-7■■■□□ 17.2
EXOSC5Q9NQT4 FAM169A-202ENST00000506954 571 ntTSL 47.3□□□□□ -1.242e-6■■■□□ 17.2
EXOSC5Q9NQT4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.662e-6■■■□□ 17.2
EXOSC5Q9NQT4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.96□□□□□ -1.782e-6■■■□□ 17.2
EXOSC5Q9NQT4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.822e-6■■■□□ 17.2
EXOSC5Q9NQT4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.257e-7■■■□□ 17.2
EXOSC5Q9NQT4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.327e-7■■■□□ 17.2
EXOSC5Q9NQT4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.362e-7■■■□□ 17.2
EXOSC5Q9NQT4 TBC1D22A-211ENST00000496139 530 ntTSL 416.75■□□□□ 0.273e-6■■■□□ 17.1
EXOSC5Q9NQT4 TBC1D22A-208ENST00000441936 590 ntTSL 416.72■□□□□ 0.273e-6■■■□□ 17.1
EXOSC5Q9NQT4 TBC1D22A-210ENST00000486163 513 ntTSL 415.86■□□□□ 0.133e-6■■■□□ 17.1
EXOSC5Q9NQT4 TBC1D22A-209ENST00000472791 558 ntTSL 413.54□□□□□ -0.243e-6■■■□□ 17.1
EXOSC5Q9NQT4 TMEM248-205ENST00000433271 1610 ntTSL 1 (best)22.18■■□□□ 1.143e-6■■■□□ 17.1
EXOSC5Q9NQT4 TMEM248-207ENST00000607045 690 ntTSL 317.11■□□□□ 0.333e-6■■■□□ 17.1
EXOSC5Q9NQT4 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.463e-6■■■□□ 17.1
EXOSC5Q9NQT4 TMEM248-204ENST00000424964 536 ntTSL 411.99□□□□□ -0.493e-6■■■□□ 17.1
EXOSC5Q9NQT4 TMEM248-203ENST00000418375 545 ntTSL 410.77□□□□□ -0.693e-6■■■□□ 17.1
EXOSC5Q9NQT4 TMEM248-202ENST00000413593 637 ntTSL 48.02□□□□□ -1.133e-6■■■□□ 17.1
EXOSC5Q9NQT4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.58□□□□□ -1.684e-16■■■□□ 17.1
EXOSC5Q9NQT4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.121e-6■■■□□ 17.1
EXOSC5Q9NQT4 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.321e-6■■■□□ 17.1
EXOSC5Q9NQT4 CDK1-207ENST00000519078 723 ntTSL 35.9□□□□□ -1.461e-6■■■□□ 17.1
EXOSC5Q9NQT4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.07□□□□□ -1.921e-6■■■□□ 17.1
EXOSC5Q9NQT4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.85□□□□□ -1.951e-6■■■□□ 17.1
EXOSC5Q9NQT4 CDK1-206ENST00000487784 598 ntTSL 52.79□□□□□ -1.961e-6■■■□□ 17.1
EXOSC5Q9NQT4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.68□□□□□ -1.981e-6■■■□□ 17.1
EXOSC5Q9NQT4 TRNT1-206ENST00000413000 483 ntTSL 413.46□□□□□ -0.255e-6■■■□□ 17
EXOSC5Q9NQT4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.335e-6■■■□□ 17
EXOSC5Q9NQT4 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC9.63□□□□□ -0.875e-6■■■□□ 17
EXOSC5Q9NQT4 TRNT1-208ENST00000434583 1871 ntTSL 28.28□□□□□ -1.085e-6■■■□□ 17
EXOSC5Q9NQT4 TRNT1-204ENST00000397779 374 ntTSL 57□□□□□ -1.295e-6■■■□□ 17
EXOSC5Q9NQT4 TRNT1-211ENST00000482311 447 ntTSL 33.79□□□□□ -1.85e-6■■■□□ 17
EXOSC5Q9NQT4 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.61□□□□□ -0.555e-7■■■□□ 17
EXOSC5Q9NQT4 ARHGAP21-203ENST00000396432 7167 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.725e-7■■■□□ 17
EXOSC5Q9NQT4 ARHGAP21-207ENST00000446003 3859 ntTSL 1 (best)10.46□□□□□ -0.735e-7■■■□□ 17
EXOSC5Q9NQT4 ARHGAP21-211ENST00000476499 1612 ntTSL 29.36□□□□□ -0.915e-7■■■□□ 17
EXOSC5Q9NQT4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.92□□□□□ -1.465e-7■■■□□ 17
EXOSC5Q9NQT4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.76□□□□□ -1.655e-7■■■□□ 17
EXOSC5Q9NQT4 ARHGAP21-204ENST00000416305 801 ntTSL 53.25□□□□□ -1.895e-7■■■□□ 17
EXOSC5Q9NQT4 ZNF207-201ENST00000321233 2283 ntTSL 1 (best) BASIC8.73□□□□□ -1.011e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-212ENST00000580759 572 ntTSL 58.55□□□□□ -1.041e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.151e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.161e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-210ENST00000579634 580 ntTSL 37.7□□□□□ -1.181e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-214ENST00000582165 592 ntTSL 57.33□□□□□ -1.241e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC7.2□□□□□ -1.261e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-206ENST00000577324 1005 ntTSL 24.53□□□□□ -1.681e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.691e-6■■■□□ 16.9
EXOSC5Q9NQT4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.36□□□□□ -1.871e-6■■■□□ 16.9
EXOSC5Q9NQT4 ZNF207-205ENST00000394679 847 ntTSL 33.01□□□□□ -1.931e-6■■■□□ 16.9
EXOSC5Q9NQT4 AC005899.4-202ENST00000578389 429 ntTSL 22.44□□□□□ -2.021e-6■■■□□ 16.9
EXOSC5Q9NQT4 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC7.75□□□□□ -1.172e-7■■■□□ 16.9
EXOSC5Q9NQT4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.67□□□□□ -1.342e-7■■■□□ 16.9
EXOSC5Q9NQT4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.542e-7■■■□□ 16.9
EXOSC5Q9NQT4 UBP1-205ENST00000456378 581 ntTSL 418.65■□□□□ 0.582e-7■■■□□ 16.9
EXOSC5Q9NQT4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.352e-7■■■□□ 16.9
EXOSC5Q9NQT4 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.622e-7■■■□□ 16.9
EXOSC5Q9NQT4 UBP1-213ENST00000496310 544 ntTSL 45.94□□□□□ -1.462e-7■■■□□ 16.9
EXOSC5Q9NQT4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.88□□□□□ -1.952e-6■■■□□ 16.9
EXOSC5Q9NQT4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.183e-6■■■□□ 16.9
EXOSC5Q9NQT4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.13■□□□□ 0.013e-6■■■□□ 16.9
EXOSC5Q9NQT4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.133e-6■■■□□ 16.9
EXOSC5Q9NQT4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14□□□□□ -0.173e-6■■■□□ 16.9
EXOSC5Q9NQT4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.683e-6■■■□□ 16.9
EXOSC5Q9NQT4 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.253e-6■■■□□ 16.9
Retrieved 100 of 8,799 protein–RNA pairs in 436.6 ms