Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn5Q9JL35 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn5Q9JL35 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn5Q9JL35 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn5Q9JL35 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn5Q9JL35 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Gm45417-201ENSMUST00000209533 758 ntBASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn5Q9JL35 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Gm6420-201ENSMUST00000193885 723 ntBASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgn5Q9JL35 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Dancr-204ENSMUST00000132389 2347 ntBASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.4■□□□□ 0.7
Hmgn5Q9JL35 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms