Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
Rtl1Q7M732 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Rtl1Q7M732 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Rtl1Q7M732 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC30.76■■■□□ 2.51
Rtl1Q7M732 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rtl1Q7M732 Gm11620-201ENSMUST00000118770 1845 ntBASIC30.76■■■□□ 2.51
Rtl1Q7M732 Gm10459-201ENSMUST00000202708 1155 ntBASIC30.76■■■□□ 2.51
Rtl1Q7M732 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rtl1Q7M732 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC30.75■■■□□ 2.51
Rtl1Q7M732 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rtl1Q7M732 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rtl1Q7M732 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
Rtl1Q7M732 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC30.75■■■□□ 2.51
Rtl1Q7M732 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Rtl1Q7M732 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rtl1Q7M732 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Rtl1Q7M732 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rtl1Q7M732 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Rtl1Q7M732 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rtl1Q7M732 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Rtl1Q7M732 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Rtl1Q7M732 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rtl1Q7M732 Gm21362-201ENSMUST00000194272 928 ntBASIC30.73■■■□□ 2.51
Rtl1Q7M732 AC130713.1-201ENSMUST00000228853 1096 ntBASIC30.73■■■□□ 2.51
Rtl1Q7M732 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Rtl1Q7M732 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Rtl1Q7M732 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rtl1Q7M732 Gm11950-201ENSMUST00000121615 838 ntBASIC30.73■■■□□ 2.51
Rtl1Q7M732 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC30.73■■■□□ 2.51
Rtl1Q7M732 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
Rtl1Q7M732 Gm21559-201ENSMUST00000220638 855 ntBASIC30.73■■■□□ 2.51
Rtl1Q7M732 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rtl1Q7M732 Gm8587-201ENSMUST00000076538 843 ntBASIC30.73■■■□□ 2.51
Rtl1Q7M732 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC30.73■■■□□ 2.51
Rtl1Q7M732 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Rtl1Q7M732 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC30.72■■■□□ 2.51
Rtl1Q7M732 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtl1Q7M732 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtl1Q7M732 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtl1Q7M732 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Rtl1Q7M732 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtl1Q7M732 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtl1Q7M732 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC30.71■■■□□ 2.51
Rtl1Q7M732 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtl1Q7M732 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtl1Q7M732 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
Rtl1Q7M732 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtl1Q7M732 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Rtl1Q7M732 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Gm13216-201ENSMUST00000117145 591 ntBASIC30.7■■■□□ 2.51
Rtl1Q7M732 Gm17808-201ENSMUST00000200859 894 ntBASIC30.7■■■□□ 2.51
Rtl1Q7M732 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rtl1Q7M732 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Rtl1Q7M732 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Rtl1Q7M732 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC30.69■■■□□ 2.5
Rtl1Q7M732 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtl1Q7M732 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Rtl1Q7M732 Mir770-201ENSMUST00000103252 94 ntBASIC30.68■■■□□ 2.5
Rtl1Q7M732 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Rtl1Q7M732 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rtl1Q7M732 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Rtl1Q7M732 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Rtl1Q7M732 Tfap2a-209ENSMUST00000225180 1828 ntBASIC30.68■■■□□ 2.5
Rtl1Q7M732 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rtl1Q7M732 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms