Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43aQ3TL54 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Gm6365-201ENSMUST00000054711 744 ntBASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43aQ3TL54 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Mir2861-201ENSMUST00000175539 82 ntBASIC18.3■□□□□ 0.52
Trim43aQ3TL54 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43aQ3TL54 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Gm13401-201ENSMUST00000117074 291 ntBASIC18.29■□□□□ 0.52
Trim43aQ3TL54 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43aQ3TL54 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim43aQ3TL54 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Trim43aQ3TL54 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43aQ3TL54 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.27■□□□□ 0.52
Trim43aQ3TL54 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43aQ3TL54 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43aQ3TL54 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Trim43aQ3TL54 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim43aQ3TL54 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim43aQ3TL54 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Trim43aQ3TL54 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trim43aQ3TL54 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim43aQ3TL54 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim43aQ3TL54 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim43aQ3TL54 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms