Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 BIL1YOR304C-A 231 nt-2.95□□□□□ -2.88
VPS13Q07878 YAL069WYAL069W 315 nt-2.96□□□□□ -2.88
VPS13Q07878 CWC23YGL128C 852 nt-2.96□□□□□ -2.88
VPS13Q07878 YKL202WYKL202W 582 nt-2.97□□□□□ -2.88
VPS13Q07878 YLR456WYLR456W 615 nt-2.97□□□□□ -2.88
VPS13Q07878 YAF9YNL107W 681 nt-2.97□□□□□ -2.89
VPS13Q07878 YGL006W-AYGL006W-A 111 nt-2.99□□□□□ -2.89
VPS13Q07878 YBR182C-AYBR182C-A 195 nt-2.99□□□□□ -2.89
VPS13Q07878 STE18YJR086W 333 nt-3□□□□□ -2.89
VPS13Q07878 ZEO1YOL109W 342 nt-3.01□□□□□ -2.89
VPS13Q07878 YPR074W-AYPR074W-A 171 nt-3.01□□□□□ -2.89
VPS13Q07878 YJL086CYJL086C 369 nt-3.03□□□□□ -2.89
VPS13Q07878 GPI15YNL038W 690 nt-3.04□□□□□ -2.9
VPS13Q07878 YOR008C-AYOR008C-A 225 nt-3.04□□□□□ -2.9
VPS13Q07878 YDR354C-AYDR354C-A 144 nt-3.06□□□□□ -2.9
VPS13Q07878 YJR087WYJR087W 351 nt-3.06□□□□□ -2.9
VPS13Q07878 YCR001WYCR001W 315 nt-3.07□□□□□ -2.9
VPS13Q07878 YJR140W-AYJR140W-A 150 nt-3.07□□□□□ -2.9
VPS13Q07878 YLR334CYLR334C 381 nt-3.07□□□□□ -2.9
VPS13Q07878 PRM3YPL192C 402 nt-3.09□□□□□ -2.9
VPS13Q07878 TOM22YNL131W 459 nt-3.1□□□□□ -2.91
VPS13Q07878 snR50snR50 90 nt-3.1□□□□□ -2.91
VPS13Q07878 YKL083WYKL083W 615 nt-3.12□□□□□ -2.91
VPS13Q07878 YER188C-AYER188C-A 300 nt-3.12□□□□□ -2.91
VPS13Q07878 HMLALPHA2YCL067C 633 nt-3.13□□□□□ -2.91
VPS13Q07878 MATALPHA2YCR039C 633 nt-3.13□□□□□ -2.91
VPS13Q07878 HMRA2YCR096C 360 nt-3.13□□□□□ -2.91
VPS13Q07878 YEL020C-BYEL020C-B 198 nt-3.13□□□□□ -2.91
VPS13Q07878 YIM2YMR151W 438 nt-3.13□□□□□ -2.91
VPS13Q07878 YNL303WYNL303W 348 nt-3.14□□□□□ -2.91
VPS13Q07878 LSM4YER112W 564 nt-3.17□□□□□ -2.92
VPS13Q07878 YER175W-AYER175W-A 165 nt-3.17□□□□□ -2.92
VPS13Q07878 YOL038C-AYOL038C-A 96 nt-3.17□□□□□ -2.92
VPS13Q07878 YGL230CYGL230C 444 nt-3.18□□□□□ -2.92
VPS13Q07878 snR24snR24 89 nt-3.19□□□□□ -2.92
VPS13Q07878 YDR426CYDR426C 378 nt-3.23□□□□□ -2.93
VPS13Q07878 YLR217WYLR217W 324 nt-3.24□□□□□ -2.93
VPS13Q07878 VPS63YLR261C 327 nt-3.25□□□□□ -2.93
VPS13Q07878 POP6YGR030C 477 nt-3.31□□□□□ -2.94
VPS13Q07878 snR67snR67 82 nt-3.32□□□□□ -2.94
VPS13Q07878 YDR102CYDR102C 333 nt-3.33□□□□□ -2.94
VPS13Q07878 YER181CYER181C 324 nt-3.33□□□□□ -2.94
VPS13Q07878 BNS1YGR230W 414 nt-3.33□□□□□ -2.94
VPS13Q07878 YOL106WYOL106W 354 nt-3.33□□□□□ -2.94
VPS13Q07878 ILM1YJR118C 612 nt-3.33□□□□□ -2.94
VPS13Q07878 YOR314W-AYOR314W-A 111 nt-3.33□□□□□ -2.94
VPS13Q07878 YHR007C-AYHR007C-A 216 nt-3.35□□□□□ -2.95
VPS13Q07878 PCC1YKR095W-A 267 nt-3.35□□□□□ -2.95
VPS13Q07878 YML099W-AYML099W-A 330 nt-3.35□□□□□ -2.95
VPS13Q07878 YDR544CYDR544C 429 nt-3.35□□□□□ -2.95
VPS13Q07878 YGR270C-AYGR270C-A 219 nt-3.35□□□□□ -2.95
VPS13Q07878 YGR069WYGR069W 336 nt-3.37□□□□□ -2.95
VPS13Q07878 YOL155W-AYOL155W-A 135 nt-3.37□□□□□ -2.95
VPS13Q07878 YNL171CYNL171C 369 nt-3.38□□□□□ -2.95
VPS13Q07878 YPR002C-AYPR002C-A 198 nt-3.41□□□□□ -2.95
VPS13Q07878 snR69snR69 101 nt-3.42□□□□□ -2.96
VPS13Q07878 YPR197CYPR197C 564 nt-3.42□□□□□ -2.96
VPS13Q07878 YOR376W-AYOR376W-A 156 nt-3.46□□□□□ -2.96
VPS13Q07878 snR59snR59 78 nt-3.51□□□□□ -2.97
VPS13Q07878 YJL136W-AYJL136W-A 84 nt-3.51□□□□□ -2.97
VPS13Q07878 YOR364WYOR364W 369 nt-3.51□□□□□ -2.97
VPS13Q07878 YNL162W-AYNL162W-A 219 nt-3.52□□□□□ -2.97
VPS13Q07878 YDL158CYDL158C 309 nt-3.55□□□□□ -2.98
VPS13Q07878 YER097WYER097W 330 nt-3.56□□□□□ -2.98
VPS13Q07878 YGL149WYGL149W 306 nt-3.56□□□□□ -2.98
VPS13Q07878 YER137W-AYER137W-A 306 nt-3.57□□□□□ -2.98
VPS13Q07878 snR73snR73 106 nt-3.58□□□□□ -2.98
VPS13Q07878 YOR316C-AYOR316C-A 210 nt-3.58□□□□□ -2.98
VPS13Q07878 snR55snR55 98 nt-3.6□□□□□ -2.99
VPS13Q07878 YJL150WYJL150W 303 nt-3.62□□□□□ -2.99
VPS13Q07878 YDR220CYDR220C 294 nt-3.64□□□□□ -2.99
VPS13Q07878 YDL011CYDL011C 324 nt-3.68□□□□□ -3
VPS13Q07878 snR6snR6 112 nt-3.68□□□□□ -3
VPS13Q07878 tD(GUC)QtD(GUC)Q 75 nt-3.7□□□□□ -3
VPS13Q07878 YPR039WYPR039W 336 nt-3.72□□□□□ -3.01
VPS13Q07878 MPC1YGL080W 393 nt-3.73□□□□□ -3.01
VPS13Q07878 YOL013W-BYOL013W-B 291 nt-3.73□□□□□ -3.01
VPS13Q07878 snR80snR80 171 nt-3.73□□□□□ -3.01
VPS13Q07878 snR57snR57 88 nt-3.74□□□□□ -3.01
VPS13Q07878 YHR180C-BYHR180C-B 105 nt-3.75□□□□□ -3.01
VPS13Q07878 YMR013C-AYMR013C-A 150 nt-3.75□□□□□ -3.01
VPS13Q07878 YGR146C-AYGR146C-A 162 nt-3.75□□□□□ -3.01
VPS13Q07878 YJL197C-AYJL197C-A 282 nt-3.75□□□□□ -3.01
VPS13Q07878 YBR196C-AYBR196C-A 150 nt-3.76□□□□□ -3.01
VPS13Q07878 BUD26YDR241W 288 nt-3.77□□□□□ -3.01
VPS13Q07878 YOR335W-AYOR335W-A 81 nt-3.77□□□□□ -3.01
VPS13Q07878 snR9snR9 187 nt-3.79□□□□□ -3.02
VPS13Q07878 YLR286W-AYLR286W-A 135 nt-3.8□□□□□ -3.02
VPS13Q07878 ATG16YMR159C 453 nt-3.82□□□□□ -3.02
VPS13Q07878 snR87snR87 109 nt-3.83□□□□□ -3.02
VPS13Q07878 RPL41BYDL133C-A 78 nt-3.88□□□□□ -3.03
VPS13Q07878 YNL146C-AYNL146C-A 195 nt-3.88□□□□□ -3.03
VPS13Q07878 YDL159C-BYDL159C-B 177 nt-3.9□□□□□ -3.03
VPS13Q07878 YAR047CYAR047C 321 nt-3.91□□□□□ -3.04
VPS13Q07878 YPR012WYPR012W 255 nt-3.92□□□□□ -3.04
VPS13Q07878 HMRA1YCR097W 381 nt-3.93□□□□□ -3.04
VPS13Q07878 YLL019W-AYLL019W-A 93 nt-3.97□□□□□ -3.04
VPS13Q07878 YOR072W-BYOR072W-B 162 nt-4.01□□□□□ -3.05
VPS13Q07878 YHR050W-AYHR050W-A 171 nt-4.01□□□□□ -3.05
VPS13Q07878 YLR406C-AYLR406C-A 150 nt-4.02□□□□□ -3.05
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms