Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 YER053C-AYER053C-A 114 nt-1.34□□□□□ -2.62
LSM6Q06406 YBR223W-AYBR223W-A 120 nt-1.34□□□□□ -2.62
LSM6Q06406 snR49snR49 165 nt-1.36□□□□□ -2.63
LSM6Q06406 YMR193C-AYMR193C-A 387 nt-1.37□□□□□ -2.63
LSM6Q06406 VPS20YMR077C 666 nt-1.38□□□□□ -2.63
LSM6Q06406 RPS27BYHR021C 249 nt-1.4□□□□□ -2.63
LSM6Q06406 APQ12YIL040W 417 nt-1.4□□□□□ -2.63
LSM6Q06406 YLR154W-FYLR154W-F 141 nt-1.4□□□□□ -2.63
LSM6Q06406 YGL052WYGL052W 306 nt-1.42□□□□□ -2.64
LSM6Q06406 YDR544CYDR544C 429 nt-1.43□□□□□ -2.64
LSM6Q06406 YGL182CYGL182C 324 nt-1.43□□□□□ -2.64
LSM6Q06406 CSE2YNR010W 450 nt-1.43□□□□□ -2.64
LSM6Q06406 YGR069WYGR069W 336 nt-1.44□□□□□ -2.64
LSM6Q06406 YPR010C-AYPR010C-A 219 nt-1.44□□□□□ -2.64
LSM6Q06406 CSN9YDR179C 489 nt-1.46□□□□□ -2.64
LSM6Q06406 YLL019W-AYLL019W-A 93 nt-1.46□□□□□ -2.64
LSM6Q06406 YOR170WYOR170W 306 nt-1.46□□□□□ -2.64
LSM6Q06406 YCR038W-AYCR038W-A 126 nt-1.47□□□□□ -2.64
LSM6Q06406 MPC1YGL080W 393 nt-1.47□□□□□ -2.64
LSM6Q06406 tP(UGG)QtP(UGG)Q 72 nt-1.47□□□□□ -2.64
LSM6Q06406 YJL047C-AYJL047C-A 135 nt-1.48□□□□□ -2.65
LSM6Q06406 EAF6YJR082C 342 nt-1.48□□□□□ -2.65
LSM6Q06406 TOM22YNL131W 459 nt-1.48□□□□□ -2.65
LSM6Q06406 YJL197C-AYJL197C-A 282 nt-1.49□□□□□ -2.65
LSM6Q06406 snR54snR54 86 nt-1.5□□□□□ -2.65
LSM6Q06406 YIL115W-AYIL115W-A 372 nt-1.51□□□□□ -2.65
LSM6Q06406 YJL077W-AYJL077W-A 87 nt-1.54□□□□□ -2.66
LSM6Q06406 TAH1YCR060W 336 nt-1.56□□□□□ -2.66
LSM6Q06406 tQ(UUG)QtQ(UUG)Q 76 nt-1.56□□□□□ -2.66
LSM6Q06406 YAF9YNL107W 681 nt-1.56□□□□□ -2.66
LSM6Q06406 BI2Q0110 1272 nt-1.57□□□□□ -2.66
LSM6Q06406 Q0255Q0255 1419 nt-1.58□□□□□ -2.66
LSM6Q06406 HMRA1YCR097W 381 nt-1.6□□□□□ -2.67
LSM6Q06406 YLR285C-AYLR285C-A 171 nt-1.6□□□□□ -2.67
LSM6Q06406 YER006C-AYER006C-A 318 nt-1.61□□□□□ -2.67
LSM6Q06406 YOR015WYOR015W 360 nt-1.61□□□□□ -2.67
LSM6Q06406 snR74snR74 88 nt-1.63□□□□□ -2.67
LSM6Q06406 YIL032CYIL032C 357 nt-1.63□□□□□ -2.67
LSM6Q06406 YML099W-AYML099W-A 330 nt-1.63□□□□□ -2.67
LSM6Q06406 YPR016W-AYPR016W-A 261 nt-1.65□□□□□ -2.67
LSM6Q06406 JLP2YMR132C 627 nt-1.66□□□□□ -2.68
LSM6Q06406 YOR072W-BYOR072W-B 162 nt-1.66□□□□□ -2.68
LSM6Q06406 YER137W-AYER137W-A 306 nt-1.67□□□□□ -2.68
LSM6Q06406 YOR314W-AYOR314W-A 111 nt-1.67□□□□□ -2.68
LSM6Q06406 YGL149WYGL149W 306 nt-1.69□□□□□ -2.68
LSM6Q06406 YER090C-AYER090C-A 90 nt-1.71□□□□□ -2.68
LSM6Q06406 YKL123WYKL123W 381 nt-1.71□□□□□ -2.68
LSM6Q06406 YNL266WYNL266W 420 nt-1.71□□□□□ -2.68
LSM6Q06406 YDR048CYDR048C 315 nt-1.72□□□□□ -2.68
LSM6Q06406 snR189snR189 189 nt-1.72□□□□□ -2.68
LSM6Q06406 snR41snR41 95 nt-1.72□□□□□ -2.68
LSM6Q06406 snR50snR50 90 nt-1.73□□□□□ -2.69
LSM6Q06406 snR69snR69 101 nt-1.74□□□□□ -2.69
LSM6Q06406 YBL039C-AYBL039C-A 84 nt-1.74□□□□□ -2.69
LSM6Q06406 SKI7YOR076C 2244 nt-1.75□□□□□ -2.69
LSM6Q06406 STE18YJR086W 333 nt-1.75□□□□□ -2.69
LSM6Q06406 YLR434CYLR434C 384 nt-1.75□□□□□ -2.69
LSM6Q06406 YDL158CYDL158C 309 nt-1.77□□□□□ -2.69
LSM6Q06406 snR60snR60 104 nt-1.78□□□□□ -2.69
LSM6Q06406 YOR121CYOR121C 306 nt-1.78□□□□□ -2.69
LSM6Q06406 YNL122CYNL122C 348 nt-1.79□□□□□ -2.7
LSM6Q06406 YBR285WYBR285W 435 nt-1.8□□□□□ -2.7
LSM6Q06406 YDR102CYDR102C 333 nt-1.82□□□□□ -2.7
LSM6Q06406 tY(GUA)QtY(GUA)Q 84 nt-1.82□□□□□ -2.7
LSM6Q06406 RDS3YPR094W 324 nt-1.85□□□□□ -2.71
LSM6Q06406 tW(UCA)QtW(UCA)Q 74 nt-1.88□□□□□ -2.71
LSM6Q06406 snR67snR67 82 nt-1.91□□□□□ -2.72
LSM6Q06406 YNR077CYNR077C 255 nt-1.92□□□□□ -2.72
LSM6Q06406 YLR406C-AYLR406C-A 150 nt-1.93□□□□□ -2.72
LSM6Q06406 YMR001C-AYMR001C-A 231 nt-1.94□□□□□ -2.72
LSM6Q06406 YER097WYER097W 330 nt-1.96□□□□□ -2.72
LSM6Q06406 YFL032WYFL032W 321 nt-1.96□□□□□ -2.72
LSM6Q06406 CDC65tQ(CUG)M 72 nt-1.96□□□□□ -2.72
LSM6Q06406 YNL028WYNL028W 318 nt-1.96□□□□□ -2.72
LSM6Q06406 YNL324WYNL324W 396 nt-1.96□□□□□ -2.72
LSM6Q06406 PMP2YEL017C-A 132 nt-1.98□□□□□ -2.73
LSM6Q06406 YGR240C-AYGR240C-A 201 nt-2.02□□□□□ -2.73
LSM6Q06406 YML054C-AYML054C-A 159 nt-2.02□□□□□ -2.73
LSM6Q06406 tM(CAU)Q2tM(CAU)Q2 78 nt-2.03□□□□□ -2.73
LSM6Q06406 YNL205CYNL205C 423 nt-2.03□□□□□ -2.73
LSM6Q06406 ATP6Q0085 780 nt-2.04□□□□□ -2.74
LSM6Q06406 BIL1YOR304C-A 231 nt-2.04□□□□□ -2.74
LSM6Q06406 YOR008C-AYOR008C-A 225 nt-2.05□□□□□ -2.74
LSM6Q06406 YLR120W-AYLR120W-A 102 nt-2.06□□□□□ -2.74
LSM6Q06406 snR77snR77 88 nt-2.07□□□□□ -2.74
LSM6Q06406 HTL1YCR020W-B 237 nt-2.08□□□□□ -2.74
LSM6Q06406 YGR146C-AYGR146C-A 162 nt-2.08□□□□□ -2.74
LSM6Q06406 YLR202CYLR202C 327 nt-2.08□□□□□ -2.74
LSM6Q06406 YOL013W-BYOL013W-B 291 nt-2.09□□□□□ -2.74
LSM6Q06406 snR39BsnR39B 96 nt-2.09□□□□□ -2.74
LSM6Q06406 YFL019CYFL019C 354 nt-2.1□□□□□ -2.75
LSM6Q06406 YNR025CYNR025C 360 nt-2.1□□□□□ -2.75
LSM6Q06406 snR81snR81 201 nt-2.11□□□□□ -2.75
LSM6Q06406 YGL041CYGL041C 204 nt-2.12□□□□□ -2.75
LSM6Q06406 YLR286W-AYLR286W-A 135 nt-2.12□□□□□ -2.75
LSM6Q06406 tD(GUC)QtD(GUC)Q 75 nt-2.13□□□□□ -2.75
LSM6Q06406 YOR381W-AYOR381W-A 168 nt-2.14□□□□□ -2.75
LSM6Q06406 YMR315W-AYMR315W-A 108 nt-2.15□□□□□ -2.75
LSM6Q06406 YKL063CYKL063C 504 nt-2.16□□□□□ -2.76
LSM6Q06406 YBR178WYBR178W 375 nt-2.21□□□□□ -2.76
Retrieved 100 of 7,029 protein–RNA pairs in 34.4 ms