Protein–RNA interactions for Protein: P53104

ATG1, Serine/threonine-protein kinase ATG1, yeastyeast

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG1P53104 NUP145YGL092W 3954 nt1.9□□□□□ -2.11
ATG1P53104 BRR2YER172C 6492 nt1.89□□□□□ -2.11
ATG1P53104 YNL103W-AYNL103W-A 90 nt1.89□□□□□ -2.11
ATG1P53104 CDC25YLR310C 4770 nt1.88□□□□□ -2.11
ATG1P53104 SXM1YDR395W 2835 nt1.88□□□□□ -2.11
ATG1P53104 YMR247W-AYMR247W-A 144 nt1.88□□□□□ -2.11
ATG1P53104 CHS1YNL192W 3396 nt1.88□□□□□ -2.11
ATG1P53104 YLR232WYLR232W 348 nt1.87□□□□□ -2.11
ATG1P53104 TRM732YMR259C 4263 nt1.86□□□□□ -2.11
ATG1P53104 AZF1YOR113W 2745 nt1.86□□□□□ -2.11
ATG1P53104 SSK2YNR031C 4740 nt1.86□□□□□ -2.11
ATG1P53104 tT(UGU)HtT(UGU)H 72 nt1.86□□□□□ -2.11
ATG1P53104 snR39BsnR39B 96 nt1.86□□□□□ -2.11
ATG1P53104 CFT1YDR301W 4074 nt1.86□□□□□ -2.11
ATG1P53104 SEC3YER008C 4011 nt1.85□□□□□ -2.11
ATG1P53104 ROM2YLR371W 4071 nt1.85□□□□□ -2.11
ATG1P53104 tM(CAU)Q2tM(CAU)Q2 78 nt1.85□□□□□ -2.11
ATG1P53104 NUP188YML103C 4968 nt1.85□□□□□ -2.11
ATG1P53104 ASE1YOR058C 2658 nt1.84□□□□□ -2.11
ATG1P53104 YHR131W-AYHR131W-A 246 nt1.83□□□□□ -2.12
ATG1P53104 VPS15YBR097W 4365 nt1.83□□□□□ -2.12
ATG1P53104 EST2YLR318W 2655 nt1.83□□□□□ -2.12
ATG1P53104 snR61snR61 90 nt1.82□□□□□ -2.12
ATG1P53104 YGR130CYGR130C 2451 nt1.79□□□□□ -2.12
ATG1P53104 RAD9YDR217C 3930 nt1.76□□□□□ -2.13
ATG1P53104 SEC8YPR055W 3198 nt1.76□□□□□ -2.13
ATG1P53104 CAT8YMR280C 4302 nt1.76□□□□□ -2.13
ATG1P53104 YHR217CYHR217C 462 nt1.75□□□□□ -2.13
ATG1P53104 CLU1YMR012W 3834 nt1.75□□□□□ -2.13
ATG1P53104 MEC1YBR136W 7107 nt1.75□□□□□ -2.13
ATG1P53104 MSH3YCR092C 3057 nt1.72□□□□□ -2.13
ATG1P53104 MSN5YDR335W 3675 nt1.72□□□□□ -2.13
ATG1P53104 YJL127W-AYJL127W-A 117 nt1.71□□□□□ -2.14
ATG1P53104 CDC39YCR093W 6327 nt1.71□□□□□ -2.14
ATG1P53104 PRP16YKR086W 3216 nt1.7□□□□□ -2.14
ATG1P53104 RPM2YML091C 3609 nt1.7□□□□□ -2.14
ATG1P53104 YDR210WYDR210W 228 nt1.7□□□□□ -2.14
ATG1P53104 PAU12YGR294W 363 nt1.69□□□□□ -2.14
ATG1P53104 YLR399W-AYLR399W-A 105 nt1.69□□□□□ -2.14
ATG1P53104 PAU24YBR301W 363 nt1.69□□□□□ -2.14
ATG1P53104 KAP120YPL125W 3099 nt1.68□□□□□ -2.14
ATG1P53104 COG6YNL041C 2520 nt1.68□□□□□ -2.14
ATG1P53104 IRA1YBR140C 9279 nt1.67□□□□□ -2.14
ATG1P53104 SBH1YER087C-B 249 nt1.67□□□□□ -2.14
ATG1P53104 YGR146C-AYGR146C-A 162 nt1.67□□□□□ -2.14
ATG1P53104 BEM3YPL115C 3387 nt1.67□□□□□ -2.14
ATG1P53104 YPR160W-AYPR160W-A 81 nt1.65□□□□□ -2.15
ATG1P53104 YGL041C-BYGL041C-B 183 nt1.63□□□□□ -2.15
ATG1P53104 tN(GUU)QtN(GUU)Q 71 nt1.62□□□□□ -2.15
ATG1P53104 PIK1YNL267W 3201 nt1.61□□□□□ -2.15
ATG1P53104 YDL073WYDL073W 2955 nt1.61□□□□□ -2.15
ATG1P53104 HKR1YDR420W 5409 nt1.61□□□□□ -2.15
ATG1P53104 RCO1YMR075W 2055 nt1.6□□□□□ -2.15
ATG1P53104 BIR1YJR089W 2865 nt1.6□□□□□ -2.15
ATG1P53104 tH(GUG)E1tH(GUG)E1 72 nt1.6□□□□□ -2.15
ATG1P53104 tH(GUG)E2tH(GUG)E2 72 nt1.6□□□□□ -2.15
ATG1P53104 tH(GUG)G1tH(GUG)G1 72 nt1.6□□□□□ -2.15
ATG1P53104 tH(GUG)G2tH(GUG)G2 72 nt1.6□□□□□ -2.15
ATG1P53104 tH(GUG)HtH(GUG)H 72 nt1.6□□□□□ -2.15
ATG1P53104 tH(GUG)KtH(GUG)K 72 nt1.6□□□□□ -2.15
ATG1P53104 tH(GUG)MtH(GUG)M 72 nt1.6□□□□□ -2.15
ATG1P53104 SEC1YDR164C 2175 nt1.59□□□□□ -2.15
ATG1P53104 YSP1YHR155W 3687 nt1.59□□□□□ -2.16
ATG1P53104 YDL247W-AYDL247W-A 75 nt1.58□□□□□ -2.16
ATG1P53104 SPC110YDR356W 2835 nt1.58□□□□□ -2.16
ATG1P53104 CCH1YGR217W 6120 nt1.58□□□□□ -2.16
ATG1P53104 tQ(UUG)E2tQ(UUG)E2 72 nt1.57□□□□□ -2.16
ATG1P53104 BUD3YCL014W 4911 nt1.57□□□□□ -2.16
ATG1P53104 YNL266WYNL266W 420 nt1.55□□□□□ -2.16
ATG1P53104 LAA1YJL207C 6045 nt1.55□□□□□ -2.16
ATG1P53104 IML1YJR138W 4755 nt1.54□□□□□ -2.16
ATG1P53104 PET127YOR017W 2403 nt1.54□□□□□ -2.16
ATG1P53104 UBP3YER151C 2739 nt1.53□□□□□ -2.16
ATG1P53104 tV(UAC)BtV(UAC)B 74 nt1.52□□□□□ -2.17
ATG1P53104 tV(UAC)DtV(UAC)D 74 nt1.52□□□□□ -2.17
ATG1P53104 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
ATG1P53104 ULP2YIL031W 3105 nt1.49□□□□□ -2.17
ATG1P53104 YBR072C-AYBR072C-A 162 nt1.49□□□□□ -2.17
ATG1P53104 GLG1YKR058W 1851 nt1.49□□□□□ -2.17
ATG1P53104 SPT7YBR081C 3999 nt1.46□□□□□ -2.18
ATG1P53104 DOP1YDR141C 5097 nt1.42□□□□□ -2.18
ATG1P53104 NNF2YGR089W 2811 nt1.42□□□□□ -2.18
ATG1P53104 snR81snR81 201 nt1.4□□□□□ -2.19
ATG1P53104 YAL037C-AYAL037C-A 93 nt1.4□□□□□ -2.19
ATG1P53104 tF(GAA)BtF(GAA)B 73 nt1.39□□□□□ -2.19
ATG1P53104 tF(GAA)FtF(GAA)F 73 nt1.39□□□□□ -2.19
ATG1P53104 tF(GAA)GtF(GAA)G 73 nt1.39□□□□□ -2.19
ATG1P53104 tF(GAA)H1tF(GAA)H1 73 nt1.39□□□□□ -2.19
ATG1P53104 tF(GAA)H2tF(GAA)H2 73 nt1.39□□□□□ -2.19
ATG1P53104 tF(GAA)MtF(GAA)M 73 nt1.39□□□□□ -2.19
ATG1P53104 tF(GAA)P1tF(GAA)P1 73 nt1.39□□□□□ -2.19
ATG1P53104 tF(GAA)P2tF(GAA)P2 73 nt1.39□□□□□ -2.19
ATG1P53104 SIP4YJL089W 2490 nt1.38□□□□□ -2.19
ATG1P53104 YLL006W-AYLL006W-A 177 nt1.36□□□□□ -2.19
ATG1P53104 SEC10YLR166C 2616 nt1.36□□□□□ -2.19
ATG1P53104 YBR196C-AYBR196C-A 150 nt1.36□□□□□ -2.19
ATG1P53104 tS(GCU)Q1tS(GCU)Q1 86 nt1.34□□□□□ -2.19
ATG1P53104 YOL083C-AYOL083C-A 141 nt1.29□□□□□ -2.2
ATG1P53104 CSE1YGL238W 2883 nt1.28□□□□□ -2.2
ATG1P53104 SCC2YDR180W 4482 nt1.27□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 8.6 ms