Protein–RNA interactions for Protein: P43639

CKB1, Casein kinase II subunit beta, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CKB1P43639 YGR146C-AYGR146C-A 162 nt2.55□□□□□ -2
CKB1P43639 NEO1YIL048W 3456 nt2.55□□□□□ -2
CKB1P43639 snR190snR190 190 nt2.55□□□□□ -2
CKB1P43639 CSF1YLR087C 8877 nt2.54□□□□□ -2
CKB1P43639 ROM2YLR371W 4071 nt2.54□□□□□ -2
CKB1P43639 STO1YMR125W 2586 nt2.53□□□□□ -2
CKB1P43639 snR62snR62 100 nt2.53□□□□□ -2
CKB1P43639 SET3YKR029C 2256 nt2.53□□□□□ -2
CKB1P43639 ASE1YOR058C 2658 nt2.51□□□□□ -2.01
CKB1P43639 RPL26BYGR034W 384 nt2.51□□□□□ -2.01
CKB1P43639 FKS1YLR342W 5631 nt2.5□□□□□ -2.01
CKB1P43639 TMA7YLR262C-A 195 nt2.5□□□□□ -2.01
CKB1P43639 YMR045CYMR045C 5268 nt2.49□□□□□ -2.01
CKB1P43639 NUP192YJL039C 5052 nt2.48□□□□□ -2.01
CKB1P43639 CFT1YDR301W 4074 nt2.47□□□□□ -2.01
CKB1P43639 WAR1YML076C 2835 nt2.47□□□□□ -2.01
CKB1P43639 YOR093CYOR093C 4947 nt2.44□□□□□ -2.02
CKB1P43639 YOL083C-AYOL083C-A 141 nt2.43□□□□□ -2.02
CKB1P43639 MON2YNL297C 4911 nt2.43□□□□□ -2.02
CKB1P43639 YDL073WYDL073W 2955 nt2.43□□□□□ -2.02
CKB1P43639 SEC3YER008C 4011 nt2.42□□□□□ -2.02
CKB1P43639 CHS1YNL192W 3396 nt2.41□□□□□ -2.02
CKB1P43639 CDC25YLR310C 4770 nt2.41□□□□□ -2.02
CKB1P43639 UBP2YOR124C 3819 nt2.4□□□□□ -2.03
CKB1P43639 SWI4YER111C 3282 nt2.39□□□□□ -2.03
CKB1P43639 GEA2YEL022W 4380 nt2.38□□□□□ -2.03
CKB1P43639 YBL071C-BYBL071C-B 99 nt2.38□□□□□ -2.03
CKB1P43639 APL3YBL037W 3078 nt2.38□□□□□ -2.03
CKB1P43639 TRM732YMR259C 4263 nt2.37□□□□□ -2.03
CKB1P43639 SAC3YDR159W 3906 nt2.35□□□□□ -2.03
CKB1P43639 PKH3YDR466W 2697 nt2.34□□□□□ -2.04
CKB1P43639 YBR200W-AYBR200W-A 165 nt2.32□□□□□ -2.04
CKB1P43639 YBR196C-AYBR196C-A 150 nt2.31□□□□□ -2.04
CKB1P43639 BRR2YER172C 6492 nt2.31□□□□□ -2.04
CKB1P43639 SEC8YPR055W 3198 nt2.31□□□□□ -2.04
CKB1P43639 NUP145YGL092W 3954 nt2.3□□□□□ -2.04
CKB1P43639 PMD1YER132C 5262 nt2.29□□□□□ -2.04
CKB1P43639 HUG1YML058W-A 207 nt2.29□□□□□ -2.04
CKB1P43639 BST1YFL025C 3090 nt2.29□□□□□ -2.04
CKB1P43639 CAT8YMR280C 4302 nt2.28□□□□□ -2.04
CKB1P43639 RPS26AYGL189C 360 nt2.28□□□□□ -2.04
CKB1P43639 AZF1YOR113W 2745 nt2.26□□□□□ -2.05
CKB1P43639 YDR034C-AYDR034C-A 177 nt2.24□□□□□ -2.05
CKB1P43639 NNF2YGR089W 2811 nt2.24□□□□□ -2.05
CKB1P43639 BEM3YPL115C 3387 nt2.23□□□□□ -2.05
CKB1P43639 YLR399W-AYLR399W-A 105 nt2.23□□□□□ -2.05
CKB1P43639 NUP188YML103C 4968 nt2.23□□□□□ -2.05
CKB1P43639 YHR214C-BYHR214C-B 5382 nt2.23□□□□□ -2.05
CKB1P43639 tN(GUU)QtN(GUU)Q 71 nt2.22□□□□□ -2.05
CKB1P43639 YBL100W-CYBL100W-C 120 nt2.22□□□□□ -2.05
CKB1P43639 SEC10YLR166C 2616 nt2.22□□□□□ -2.05
CKB1P43639 PRP16YKR086W 3216 nt2.22□□□□□ -2.05
CKB1P43639 YOL164W-AYOL164W-A 183 nt2.21□□□□□ -2.06
CKB1P43639 YPR160W-AYPR160W-A 81 nt2.2□□□□□ -2.06
CKB1P43639 UBP3YER151C 2739 nt2.2□□□□□ -2.06
CKB1P43639 DNF3YMR162C 4971 nt2.19□□□□□ -2.06
CKB1P43639 CLU1YMR012W 3834 nt2.19□□□□□ -2.06
CKB1P43639 YSP1YHR155W 3687 nt2.17□□□□□ -2.06
CKB1P43639 YGR240C-AYGR240C-A 201 nt2.17□□□□□ -2.06
CKB1P43639 EST2YLR318W 2655 nt2.16□□□□□ -2.06
CKB1P43639 PIK1YNL267W 3201 nt2.16□□□□□ -2.06
CKB1P43639 YGR130CYGR130C 2451 nt2.14□□□□□ -2.07
CKB1P43639 CDC39YCR093W 6327 nt2.13□□□□□ -2.07
CKB1P43639 GLG1YKR058W 1851 nt2.12□□□□□ -2.07
CKB1P43639 ULP2YIL031W 3105 nt2.12□□□□□ -2.07
CKB1P43639 MSN5YDR335W 3675 nt2.12□□□□□ -2.07
CKB1P43639 MSH3YCR092C 3057 nt2.11□□□□□ -2.07
CKB1P43639 YLR286W-AYLR286W-A 135 nt2.11□□□□□ -2.07
CKB1P43639 SXM1YDR395W 2835 nt2.08□□□□□ -2.08
CKB1P43639 VPS15YBR097W 4365 nt2.07□□□□□ -2.08
CKB1P43639 tD(GUC)QtD(GUC)Q 75 nt2.01□□□□□ -2.09
CKB1P43639 tT(UGU)HtT(UGU)H 72 nt2.01□□□□□ -2.09
CKB1P43639 snR47snR47 99 nt2.01□□□□□ -2.09
CKB1P43639 YPL060C-AYPL060C-A 3315 nt2□□□□□ -2.09
CKB1P43639 ORC3YLL004W 1851 nt1.99□□□□□ -2.09
CKB1P43639 tH(GUG)E1tH(GUG)E1 72 nt1.99□□□□□ -2.09
CKB1P43639 tH(GUG)E2tH(GUG)E2 72 nt1.99□□□□□ -2.09
CKB1P43639 tH(GUG)G1tH(GUG)G1 72 nt1.99□□□□□ -2.09
CKB1P43639 tH(GUG)G2tH(GUG)G2 72 nt1.99□□□□□ -2.09
CKB1P43639 tH(GUG)HtH(GUG)H 72 nt1.99□□□□□ -2.09
CKB1P43639 tH(GUG)KtH(GUG)K 72 nt1.99□□□□□ -2.09
CKB1P43639 tH(GUG)MtH(GUG)M 72 nt1.99□□□□□ -2.09
CKB1P43639 LAA1YJL207C 6045 nt1.97□□□□□ -2.09
CKB1P43639 SSK2YNR031C 4740 nt1.97□□□□□ -2.09
CKB1P43639 MEC1YBR136W 7107 nt1.96□□□□□ -2.1
CKB1P43639 CCH1YGR217W 6120 nt1.95□□□□□ -2.1
CKB1P43639 EST1YLR233C 2100 nt1.95□□□□□ -2.1
CKB1P43639 snR69snR69 101 nt1.92□□□□□ -2.1
CKB1P43639 YMR247W-AYMR247W-A 144 nt1.92□□□□□ -2.1
CKB1P43639 CSE1YGL238W 2883 nt1.91□□□□□ -2.1
CKB1P43639 YLR299C-AYLR299C-A 93 nt1.91□□□□□ -2.1
CKB1P43639 snR53snR53 91 nt1.9□□□□□ -2.11
CKB1P43639 IML1YJR138W 4755 nt1.89□□□□□ -2.11
CKB1P43639 FIG2YCR089W 4830 nt1.88□□□□□ -2.11
CKB1P43639 NST1YNL091W 3723 nt1.86□□□□□ -2.11
CKB1P43639 PET127YOR017W 2403 nt1.86□□□□□ -2.11
CKB1P43639 YDL159C-BYDL159C-B 177 nt1.85□□□□□ -2.11
CKB1P43639 snR64snR64 101 nt1.83□□□□□ -2.12
CKB1P43639 YLL006W-AYLL006W-A 177 nt1.83□□□□□ -2.12
CKB1P43639 RDS3YPR094W 324 nt1.83□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms